Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0148 ATGGAGAATCCCTCTGAATTACTTGGCCCCACTGGGTTGATTAGCAAAGATGAATTCGTGAGGATCATAGCTCAGAGCCTATATTCATCAGGGTACAACAATTCTGCATCACAATTAGAATTGGAATCTGGTGTTTCATACAAGTGCCAGGAGTTTCAATTGCTCGAAACACATGTAGTGAATGGGGATTGGGACAATTGCACCACTGTTCTGAATTCCATAAAGGATGTGTTGGGTAAACCTATGGATTCTGCTCTTTTTCTTGTCTTGAGACAACATTTTGTGGAGCATGTGAGTCGCGGCGAGGTTGCTCCGGCTTTGGATTTGTTAAGGAAACAGATTTCTGTTTTGCATGTGGACAAGTGCAAGGTTCATAGCCTGGCTAATACATTGATTACCTTAAAGAATGATGAGTTAGGTGCTATAGATGGTTGTGATGTTCATGCTTTAAGAAGAAGGTTGTTAAAAGAACTGGAAAATTTGCTCCCACCTCCAATTTCGTTTCCTGAAAGACGATTAGAGTATTTAGTTGAAAGTTCTATTCTTTCTTCTTTTAATCAGTGTATGTATCATAACTCATCAGATCCTGTTTCACTTTTTGAGGATCATCACTGTCTTAGCGATCAGAATCAGCTTCCTACTAGAACCATTCAGACATTGACTGAACACCCAGATGGAGTTTGGAATATTAAATTTTCTAACAACGGGGAGTTCCTAGCCTCTACAGACTATATAGACGTCATCATTTGGAAGGTGGACGAACATTGGAACTTGAGTCCAGTGGCAAAGCTAAACAACCCTCCCGCAGTAGATATTTTAGAATGGAGTCCTGATGATACCATGTTGCTAGTATATGGGAACGAAGGTTTGAAACTATGGGATATTGGAACAGGTACATGCAAGCTCACTATGGGGAACCAACACTTGGGATCTGGTATTGGCACCTTTGCCTGGTATCCCAACTCAACGCAGTTTGCGTGGGGCTGTTTTTCCGGTGAACCCGGCATCTACATGTTGGATTCTGATGCCAAAATGAATCAAGTACAACAAGTAAGATGGTTGCCCAAGGTTGAACGTGTTGCTTTTACTCCAGACGGTGCGCATTACATCTGCACATCCACGAGTAATGACATTCTGATCCATCATATTGGAGGGGAAGCTGACAAAGTCGTTTCGGAGAAGCATGGGATCACGTCCCTTTCAGTTTCAGGAGATAGTTTGTTCTTCATTGTCAGCCTATGCGACAGTGGGATTCACATGTGGGATGTGGCTGGGAGATGGAATACCCCACAAATTTTCTTGGGCCACAAGCAAGACGATAGTGTGATAATGTCATGCTTTGGTGGATGGAATAGCAGGTTTATTGCCAGTGGTAGTGACGATTCAAAGGTATACATTTGGAATCGCAGTTACCATGGTAATCCTATAAAGGTCTTATCTGGGCACTCCAAGGCTGTGAACTGTGTGAGCTGGAACCCCAAAAAACCACAGATGTTGGCATCTGCAAGCGAGGATTGCACAATCCGTATATGGGCACCCAACTCATAA 1548 0.4296 MENPSELLGPTGLISKDEFVRIIAQSLYSSGYNNSASQLELESGVSYKCQEFQLLETHVVNGDWDNCTTVLNSIKDVLGKPMDSALFLVLRQHFVEHVSRGEVAPALDLLRKQISVLHVDKCKVHSLANTLITLKNDELGAIDGCDVHALRRRLLKELENLLPPPISFPERRLEYLVESSILSSFNQCMYHNSSDPVSLFEDHHCLSDQNQLPTRTIQTLTEHPDGVWNIKFSNNGEFLASTDYIDVIIWKVDEHWNLSPVAKLNNPPAVDILEWSPDDTMLLVYGNEGLKLWDIGTGTCKLTMGNQHLGSGIGTFAWYPNSTQFAWGCFSGEPGIYMLDSDAKMNQVQQVRWLPKVERVAFTPDGAHYICTSTSNDILIHHIGGEADKVVSEKHGITSLSVSGDSLFFIVSLCDSGIHMWDVAGRWNTPQIFLGHKQDDSVIMSCFGGWNSRFIASGSDDSKVYIWNRSYHGNPIKVLSGHSKAVNCVSWNPKKPQMLASASEDCTIRIWAPNS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0148 515 PANTHER WD REPEAT-CONTAINING PROTEIN 26 10 514 - -
Aev06g0148 515 SMART ctlh 48 105 IPR006595 -
Aev06g0148 515 PANTHER WD REPEAT PROTEIN 26-RELATED 10 514 - -
Aev06g0148 515 Gene3D - 471 515 IPR015943 GO:0005515
Aev06g0148 515 SMART WD40_4 384 422 IPR001680 GO:0005515
Aev06g0148 515 SMART WD40_4 213 251 IPR001680 GO:0005515
Aev06g0148 515 SMART WD40_4 347 382 IPR001680 GO:0005515
Aev06g0148 515 SMART WD40_4 257 294 IPR001680 GO:0005515
Aev06g0148 515 SMART WD40_4 426 468 IPR001680 GO:0005515
Aev06g0148 515 SMART WD40_4 472 512 IPR001680 GO:0005515
Aev06g0148 515 SMART WD40_4 297 340 IPR001680 GO:0005515
Aev06g0148 515 Pfam WD domain, G-beta repeat 216 244 IPR001680 GO:0005515
Aev06g0148 515 Pfam WD domain, G-beta repeat 431 468 IPR001680 GO:0005515
Aev06g0148 515 Pfam WD domain, G-beta repeat 473 511 IPR001680 GO:0005515
Aev06g0148 515 Gene3D - 206 470 IPR015943 GO:0005515
Aev06g0148 515 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 48 105 IPR006595 -
Aev06g0148 515 ProSiteProfiles Trp-Asp (WD) repeats profile. 479 515 IPR001680 GO:0005515
Aev06g0148 515 ProSiteProfiles LIS1 homology (LisH) motif profile. 15 47 IPR006594 GO:0005515
Aev06g0148 515 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 479 515 - -
Aev06g0148 515 SUPERFAMILY WD40 repeat-like 213 513 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0148 Aev-Chr6 1157981 1162053 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0148 K22382 - gmx:100818922 533.102