Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0145 ATGACGGGGGTTCCCAGGGTTCGTGATCAAAGCTCGATTGCATCTTCATCTTCCCATAATTCTAATAGCAGCGGTAGCAATGTATTTAGTTTGCTGGCGCGGAGAGAGATTTCACATAGAACGAAACACATCGCAAAGTGGCATTGGGGAGATGCTTCTAAATCAAAATCTGGTTCTTACTCCCGTCCAAAAAATGTAGCGAGAGACGCAAGGCGTGGCCTCCTCTCATGGGTTGAAGCTGAGTCATTGCGGCATTTGTCAGCGAAGTATTGTCCTTTAGTGCCTGCCCCACGTTCTACTATTGCAGCAGCATTTAGTCCAGACGGAAAAGTTCTTGCATCCACACATGGTGATCACACAGTAAAGATTATTGATTGTGAATCTGGAAGTTGCTTAAAGGTGCTCGTTGGCCATAGGAGGACACCTTGGGTGGTTAGGTTCCATCCATTGCATCCACAAATACTTGCTAGTGGTAGCTTGGATCAAGAAGTTCGTTTATGGGACGCTAACACATCAGAGTGCATAATATCTCATCATTTCTATCGTCCTATTGCATCCATTGCTTTTCATTCCAAGGGGGAAATAATCGCTGTTGCATCAGGCCACAAGCTGTATATATGGCACTACAACAAGAAAGGTGAAGCAGCCTCACCAATATTTGTGTTGAAGACAAGGCGCTCCCTTCGAGCTGTGCATTTTCACCCGCATGCTGCACCATACCTCTTAACTGCCGAGGTAAATGATCTGGATTCTTCAGATTCCTCAATGACAGAAGCAACATCTCTTGGTTATTTACAATATCCTCCACCTGCTGTTTTTGTCACAAATATTCATCCTAGGGAACATATTAGTCCATCTAGTGAACTGCCCTATGCGTCATTACCTTTCCTCATCGTACAATCATATGGTGTCGATGAGTCAAGACCAGAAGTCCAGCACACTAGTCATGATGTTGGCTCAGGTAGCATGCAAGTTGAATCTTCTGCCATGGTGCAATTTCAAACGGATACAAATGCAACTGAGCAATATGATGCTACAGTGTCTCCCATGGAAACATTCTCTGAGGTTCCCACTAGTTCTCAAACTGGTACAAACTATTCTGCTCATGCTATGTTCCCTAATGGAATGGGAATTGGCATCGGTAACCTTACCATGGATGGTATGGAGACTGATGAAACTGAACATGCTGGAGGAAACCAACATGGAAACCCTACTAATGTCTATTCTCTCAATGGTGTGCTACATGGACAGTCAAGGCAAACTGCAAATCGTGAGGTTCTTCCAGAGTTTGGTCAATTTCATCAGTTTTTTCCTTCAAGAGACCCAAGTGGATGGGAGTTGCCTTTTTTGCAAGGATGGTTGATGGGTCAAAGCCAAGTTGGTGTTCCCTCAATGGCTCCTAACATGGGTGTTAGTCGTGACAGTGTAGGTCAACAGATTCCATCTAACCTTTCGACTTCTACTGCTGATTTAGCAATGCCTGGCAGCATCAGCATACCTGGATCTTCTGTGAGATCAGGTTCACGGAACCATTTTTCACAATCCCGTGTACCTGTATCAGAATCTGGAAATCACACTGCTTCTATTAGTTCCCAGCATGATGGGTCTGATCTTCAAACCATCATAAGTCGAATCCAGTCAGAACTGGCAACATCAATGACTGCAGTGACAGCTGCAGAGTTGCCCTGCACTGTGAAGTTAAGAGTATGGTCACATGACATAAAAAATCCCTGTGCTCCACTAAATGCTGACAGATGCCGTCTAACTATTCCACATGCTGTCCTCTGCAGTGAAATGGGTGCCCATTTTTCACCATGCGGTAGATTCTTAGCTGCCTGTGTTGCATGTATGCTTCCTCATATTGAAGCTGATCCTGGATTACAAACACCGGTACACCAAGATCCTGGCATTGCAACATCACCAACTCGCCATCCAATCTCAGCGCACCAAGTCATGTATGAGCTGCGGATTTATTCCCTTGAGGAGGCTACGTTTGGATCAATACTTGCTTCACGGGCAATTAGAGCGGCTCACTGTCTGACATCAATTCAGTTCTCACCTACATCTGAGCACATACTACTTGCCTATGGCCGACGCCATGGTTCTCTTCTTAAAAGCATTGTCATTGATGGAGAAACAACCTTACCTATATATACAGTGTTAGAGGTATATAGAGTATCGGATATGGAACTTGTTAGGGTACTTCCTAGTGCAGAAGATGAGGTCAACGTTGCATGCTTTCATCCTTTTGCTGGGGGAGGGCTAGTTTATGGAACAAAGGAAGGAAAGCTTAGGATACTCCAGTACGATGGTGCTCATGCTGTGAATGGTGCCGGGCCGAGTTACTTTCCTGATGAGACCATCATTGGAATCAGTCAGTGA 2382 0.4496 MTGVPRVRDQSSIASSSSHNSNSSGSNVFSLLARREISHRTKHIAKWHWGDASKSKSGSYSRPKNVARDARRGLLSWVEAESLRHLSAKYCPLVPAPRSTIAAAFSPDGKVLASTHGDHTVKIIDCESGSCLKVLVGHRRTPWVVRFHPLHPQILASGSLDQEVRLWDANTSECIISHHFYRPIASIAFHSKGEIIAVASGHKLYIWHYNKKGEAASPIFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSLGYLQYPPPAVFVTNIHPREHISPSSELPYASLPFLIVQSYGVDESRPEVQHTSHDVGSGSMQVESSAMVQFQTDTNATEQYDATVSPMETFSEVPTSSQTGTNYSAHAMFPNGMGIGIGNLTMDGMETDETEHAGGNQHGNPTNVYSLNGVLHGQSRQTANREVLPEFGQFHQFFPSRDPSGWELPFLQGWLMGQSQVGVPSMAPNMGVSRDSVGQQIPSNLSTSTADLAMPGSISIPGSSVRSGSRNHFSQSRVPVSESGNHTASISSQHDGSDLQTIISRIQSELATSMTAVTAAELPCTVKLRVWSHDIKNPCAPLNADRCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPHIEADPGLQTPVHQDPGIATSPTRHPISAHQVMYELRIYSLEEATFGSILASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFAGGGLVYGTKEGKLRILQYDGAHAVNGAGPSYFPDETIIGISQ* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0145 793 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 1 792 - -
Aev06g0145 793 ProSitePatterns Trp-Asp (WD) repeats signature. 155 169 IPR019775 -
Aev06g0145 793 Gene3D - 81 256 IPR015943 GO:0005515
Aev06g0145 793 Pfam WD domain, G-beta repeat 102 125 IPR001680 GO:0005515
Aev06g0145 793 Pfam WD domain, G-beta repeat 129 168 IPR001680 GO:0005515
Aev06g0145 793 MobiDBLite consensus disorder prediction 1 26 - -
Aev06g0145 793 ProSiteProfiles Trp-Asp (WD) repeats profile. 135 177 IPR001680 GO:0005515
Aev06g0145 793 MobiDBLite consensus disorder prediction 465 535 - -
Aev06g0145 793 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 95 770 IPR011047 -
Aev06g0145 793 SMART WD40_4 728 768 IPR001680 GO:0005515
Aev06g0145 793 SMART WD40_4 171 208 IPR001680 GO:0005515
Aev06g0145 793 SMART WD40_4 128 168 IPR001680 GO:0005515
Aev06g0145 793 SMART WD40_4 87 125 IPR001680 GO:0005515
Aev06g0145 793 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 1 792 - -
Aev06g0145 793 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 135 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0145 Aev-Chr6 1141707 1146711 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0145 66 207 Miscellaneous Gene Families AT5G08390 29.139 5.19e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0145 - K17985 gmx:100817857 1374.76