Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0138 ATGGAGGACGAAGCTGACATATACGACGGTGATAGAGCACAGTTCCCTCTTACGTTCGGTAAGCAATCGAAATCTCAGACTCCTCTCGAAGCTATCCACAACGCCACGCGCCGTTCCAATCCCAATGTCGCCACAAAACCCTCTTCTTCGAAAACTGCCAGTGATCTTCCTTCTCTCTCTTCTTCTTCCAAGGAATGGCTCAATTCCCTTCGCTCCTCCAAAAACCCTACGCCTCCCCGTTTTACTGCCGATCGCGGAGGTGATTCAGGGATTGGACCGCCGCCTCCGCCGCCGGGAGATGCGGCTGAGGATTCCGATGGAGATGATGGTGTTATGGTTGGGCCACCTCGTCCGCCTCCGCCGGCGGATGAGGAGGACGAGGACGAGGACGGTGAGATGGTTGGGCCGCCTCCGCCTCCGTCTGGTTCCAATTTGAGCTCCGATGACGAAGGTTCCGATGAAGAAGAGCTGGGGAATCGATTCCGGATTCCGCTTAGCAATGAGATTGTCCTCAAGGGTCACACCAAGGTTGTGTCAGCTCTTGCTGTTGATCACACTGGATCTAGAGTGCTTTCTGGAAGTTATGACTATTCAGTACGCATGTATGACTTTCAAGGGATGAATTCTCGTCTGCAATCGTTTCGACAACTGGAGCCATTTGAAGGTCATCAAGTTCGCAATTTAAGCTGGAGTCCAACTGCAGATCGCTTTTTGTGCGTGACTGGATCAGCTCAAGCAAAGATTTATGATCGTGATGGGCTTACTTTGGGAGAGTTTGTGAAGGGAGACATGTATATCCGTGACCTAAAGAATACCAAGGGCCACATATCTGGGTTGACATGTGGAGAGTGGCATCCAAAAACTAAAGAGACGATTTTGACATCATCGGAGGACGGTTCACTACGGATATGGGATGTGAATGACTTCAAAAGTCAGAAGCAGGTTATCAAACCAAAGCTTGCAAGACCTGGAAGAGTTCCTGTAACCACGTGTGCATGGAACCAGGATGGTAAATGCATTGCTGGTGGTATTGGAGATGGTTCTATACAGGTTTGGAGTATCAAGCCAGGATGGGGGAGTAGGCCAGATATACATATTGAAAAATGTCATTCAGATGATATTACTGGTCTGAAATTTTCTAGTGATGGGAATATGTTATTGTCAAGAAGCTTTGATGGTTCATTAAAGGTTTGGGATTTGCGCAAAACAAAGCAAGTTTTGAAGGTATTTGAGGATCTTCCAAATAACTATGGACAAACAAATATTGCCTTCAGTCCTGGTGAGCAACTCTTTTTTACTGGAACATCTGTTGAAAGGGAGAGCTCGACGGGAGGTTTATTGTGCTTCTTTGATAGAGCAAACCTTGAGCTTGTTTCAAGAGTTGGCATATCTCCAACTTGTAGTGTCGTTCAGTGTTCTTGGCATCCTAAACTGAATCAGATCTTTGCAACTGTTGGTGATAAAAGCCAAGGAGGGACTCACATACTATATGATCCAACCATCAGCGAGAGAGGAGCCCTTGTTTGTGTTGCACGTGCACCGAGGAAAAAATCAATTGATGATTTTGAGGCCAAACCTGTGATTCACAATCCTCATGCTTTACCTCTATTTAGAGATCAGCCGAGCCGTAAGCGTCAGCGAGAAAAGGTACTCAAGGATCCATTAAAGTCCCACAAGCCCGAACTTCCCATAACAGGACCTGGCTTTGGTGGACGAGTTGGTGCAAGTCAAGGAAGCTTACTGACCCAGTACCTTCTAAAGCAAGGGGGAATGATCAAGGAGACATGGATGGAGGAGGATCCAAGGGAAGCCATCTTGAAATACGCCGATGCTGCAGCAAAGGATCCAAAGTTCATCGCTCCAGCATATGCAGAAACCCAACCCGAGCCAGTTTTCGCAAAGTCAGATTCCGAGGATGAGGAGAAATGA 1929 0.4733 MEDEADIYDGDRAQFPLTFGKQSKSQTPLEAIHNATRRSNPNVATKPSSSKTASDLPSLSSSSKEWLNSLRSSKNPTPPRFTADRGGDSGIGPPPPPPGDAAEDSDGDDGVMVGPPRPPPPADEEDEDEDGEMVGPPPPPSGSNLSSDDEGSDEEELGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYSVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHISGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWNQDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHIEKCHSDDITGLKFSSDGNMLLSRSFDGSLKVWDLRKTKQVLKVFEDLPNNYGQTNIAFSPGEQLFFTGTSVERESSTGGLLCFFDRANLELVSRVGISPTCSVVQCSWHPKLNQIFATVGDKSQGGTHILYDPTISERGALVCVARAPRKKSIDDFEAKPVIHNPHALPLFRDQPSRKRQREKVLKDPLKSHKPELPITGPGFGGRVGASQGSLLTQYLLKQGGMIKETWMEEDPREAILKYADAAAKDPKFIAPAYAETQPEPVFAKSDSEDEEK* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0138 642 ProSiteProfiles Trp-Asp (WD) repeats profile. 171 212 IPR001680 GO:0005515
Aev06g0138 642 CDD WD40 170 489 - -
Aev06g0138 642 Gene3D - 119 260 IPR015943 GO:0005515
Aev06g0138 642 Gene3D - 261 500 IPR015943 GO:0005515
Aev06g0138 642 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 367 401 - -
Aev06g0138 642 PRINTS G protein beta WD-40 repeat signature 340 354 IPR020472 -
Aev06g0138 642 PRINTS G protein beta WD-40 repeat signature 292 306 IPR020472 -
Aev06g0138 642 PRINTS G protein beta WD-40 repeat signature 386 400 IPR020472 -
Aev06g0138 642 SUPERFAMILY WD40 repeat-like 160 487 IPR036322 GO:0005515
Aev06g0138 642 MobiDBLite consensus disorder prediction 1 156 - -
Aev06g0138 642 SMART WD40_4 309 353 IPR001680 GO:0005515
Aev06g0138 642 SMART WD40_4 164 203 IPR001680 GO:0005515
Aev06g0138 642 SMART WD40_4 360 399 IPR001680 GO:0005515
Aev06g0138 642 SMART WD40_4 213 250 IPR001680 GO:0005515
Aev06g0138 642 SMART WD40_4 262 305 IPR001680 GO:0005515
Aev06g0138 642 MobiDBLite consensus disorder prediction 621 642 - -
Aev06g0138 642 ProSiteProfiles Trp-Asp (WD) repeats profile. 272 314 IPR001680 GO:0005515
Aev06g0138 642 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 272 307 - -
Aev06g0138 642 Pfam WD domain, G-beta repeat 270 305 IPR001680 GO:0005515
Aev06g0138 642 Pfam WD domain, G-beta repeat 169 203 IPR001680 GO:0005515
Aev06g0138 642 Pfam WD domain, G-beta repeat 366 399 IPR001680 GO:0005515
Aev06g0138 642 Pfam WD domain, G-beta repeat 327 353 IPR001680 GO:0005515
Aev06g0138 642 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 171 205 - -
Aev06g0138 642 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 3 642 - -
Aev06g0138 642 MobiDBLite consensus disorder prediction 18 79 - -
Aev06g0138 642 ProSiteProfiles Trp-Asp (WD) repeats profile. 367 408 IPR001680 GO:0005515
Aev06g0138 642 ProSitePatterns Trp-Asp (WD) repeats signature. 292 306 IPR019775 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0138 274 466 Miscellaneous Gene Families AT5G08390 23.196 3.68e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0138 K24752 - rcu:8266697 981.859