Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0131 ATGGCAGCTACCCTGCACTCCCTGGCATTGTCATCTCCACTCTCCAAACCTCATGCTCATCATAACTCACATTCATATTCAGCCCCATCTTCAATTGTTCAGTGCAGCACACACTCCTCATTCAATGGCCAATCTCTACGCCTCGCCTGTTTGAGGTTACCTAGGCTAACACAAAGTCCTCCCAAGCTTGCACCTGTTATCATGATGGTGAAACCAGCCATACAGTTCATCCAAGGAACCGATGAACTGACAATACCGGACGTGAGGCTGACTAAATCAAGAGACGGAACAAACGGCATGGCTATCTTCACCTTTGATCAACCCTCAGTTTTCGATTCTTCCGGTGAAGTTGGCGATATCACCGGTTTTTACATGATTGATGAGGAAGGAGTCCTTCAGTCAGTTGATGTGAGTGCCAAATTCGTCAACGGAAAGCCCTCACGGATCGAAGCGAAGTATGTGATGAGGACTCCTAGGGAGTGGGATAGGTTCATGAGATTCATGGAGCGATACTCTAATGCAAACGGTTTGCAATTCATAAAAAAATGA 549 0.4645 MAATLHSLALSSPLSKPHAHHNSHSYSAPSSIVQCSTHSSFNGQSLRLACLRLPRLTQSPPKLAPVIMMVKPAIQFIQGTDELTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVSAKFVNGKPSRIEAKYVMRTPREWDRFMRFMERYSNANGLQFIKK* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0131 182 Pfam Psb28 protein 74 179 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
Aev06g0131 182 Gene3D Photosystem II Psb28 72 182 IPR038676 -
Aev06g0131 182 Hamap Photosystem II reaction center Psb28 protein [psb28]. 71 180 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
Aev06g0131 182 TIGRFAM PS_II_psb28: photosystem II reaction center protein Psb28 74 180 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
Aev06g0131 182 PANTHER - 2 182 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0131 K08903 - gmx:100780777 295.819