Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0126 ATGGCGTCTTCCTACCCTGGTTCCGTTAGTGCTGCCCAGGTGGGCTCTTACTTCGTCGGACAGTACTATCAAGTTCTCCGGCAACAGCCAAATCTCGTTCACCAGTTCTATGCTGATTCCAGCAGCATGGTTCGCGTCGATGGGGATTCCACCGAGACTGCATCTGATGTGCTGCAAATTCACTCAATTGTCTCCTCACTGAATTTGACTACGATTGAGATCAAGACAATCAATTCTCTTGATTCTTGGGATGGAGGTGTGCTTGTAGTGGTCTCAGGTTTTGTCAAGATGAAGGATTTTGGCGTCAGACGGAAGTTTGTTCAAACTTTCTTTCTCGCTCCTCAGGAGAAGGGTTACTTTGTACTGAATGATATATTTCATTTTGTTGATGATGGAATTGTGTACCAAATTGGTATCAGGACCACTGAAAATGCTGACATACAACCACATTTGTCTCCATCTCTTGCTGAGCCACCAGCTACCGACTATGGTTTGGAGGAAGAAGCTAGGGAATATGTCAACTCTGTGCATATAGATGATGATCCAGTGGACAAGTATAGTCTTCCTGAGCAGCATCATCAGCAACTACAAGAAGATCTTGAAACTGAAATTGTGGTGGAAGAAGAAACTCCGGCAGAGGAGCCATCTCCACCAATTCAAAGTGGCCCACACACCATCCATGAAACCCCTGTTTCTCACGTGGAAGAATCACTGGAGGAGCCTCCTAAGAAAACTTATGCATCTATTTTACGACTCGTAAGAGGTCAATCAGGCTTTTCAGCTGCTCCCCAACATGCTCCACAACATTCATTTAAAAGCACTGCTCCTCCTCCTGAGTTAAATCATGTTGCACAGCCTGCTGTTCAGCAGCCAAGTTCTGCATCTGCATATGTTCCCGATTCTGCCATTGAGGCAGCAGAGGAAGCTTATGGACTAGAAGAAGAAGGTGAGGTGACTTCTGTGTATGTGAGAAACTTGCCTCCAAATGTTACTGAATCTGAGATTGACCAGGAATTTAAAAACTTTGGCAAAATTAAGCCGGATGGAATATTCATTAGGGTTCGAAAGGAGATTGGAGTTTGCTATGCTTTTGTGGAATTTGAAGACATGATTGGTGTTCAAAATGCTCTTCAGGCATCTCCCATACAATTGGCTGGTAGACAAGTATACATAGAGGAGAGGAGACCAAACAGTGGCAATGCAGCTCGGGGAGGAGGAAGAAGGGGAAGGGGCAGAGGCAGTTATCAAACGGATGCTCCAAGGGGTCGTTTTGGTGCTAGGAGCTTAGGCAGGGGAAATAACCAGGAAGCTTCGGACTATACCAGACTAAGAGGCGACGGTTATTCTTATTCTCAGCGTGGTTCGCGATAA 1371 0.4559 MASSYPGSVSAAQVGSYFVGQYYQVLRQQPNLVHQFYADSSSMVRVDGDSTETASDVLQIHSIVSSLNLTTIEIKTINSLDSWDGGVLVVVSGFVKMKDFGVRRKFVQTFFLAPQEKGYFVLNDIFHFVDDGIVYQIGIRTTENADIQPHLSPSLAEPPATDYGLEEEAREYVNSVHIDDDPVDKYSLPEQHHQQLQEDLETEIVVEEETPAEEPSPPIQSGPHTIHETPVSHVEESLEEPPKKTYASILRLVRGQSGFSAAPQHAPQHSFKSTAPPPELNHVAQPAVQQPSSASAYVPDSAIEAAEEAYGLEEEGEVTSVYVRNLPPNVTESEIDQEFKNFGKIKPDGIFIRVRKEIGVCYAFVEFEDMIGVQNALQASPIQLAGRQVYIEERRPNSGNAARGGGRRGRGRGSYQTDAPRGRFGARSLGRGNNQEASDYTRLRGDGYSYSQRGSR* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0126 456 MobiDBLite consensus disorder prediction 395 456 - -
Aev06g0126 456 Pfam Nuclear transport factor 2 (NTF2) domain 14 128 IPR002075 -
Aev06g0126 456 SUPERFAMILY RNA-binding domain, RBD 316 423 IPR035979 GO:0003676
Aev06g0126 456 MobiDBLite consensus disorder prediction 259 281 - -
Aev06g0126 456 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 321 384 IPR000504 GO:0003723
Aev06g0126 456 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 319 396 IPR000504 GO:0003723
Aev06g0126 456 SMART rrm1_1 320 392 IPR000504 GO:0003723
Aev06g0126 456 Gene3D - 302 448 IPR012677 -
Aev06g0126 456 Gene3D - 5 132 - -
Aev06g0126 456 MobiDBLite consensus disorder prediction 208 242 - -
Aev06g0126 456 PANTHER GB|AAD20086.1 9 448 - -
Aev06g0126 456 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 9 448 IPR039539 -
Aev06g0126 456 CDD RRM_SF 321 392 - -
Aev06g0126 456 ProSiteProfiles Nuclear transport factor 2 domain profile. 14 128 IPR018222 -
Aev06g0126 456 SUPERFAMILY NTF2-like 10 129 IPR032710 -
Aev06g0126 456 CDD NTF2 10 130 IPR018222 -
Aev06g0126 456 MobiDBLite consensus disorder prediction 261 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0126 Aev-Chr6 1000308 1004570 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0126 - - gmx:100787900 662.529