Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0125 ATGGGAGATAGCGAAACAGTAGCTGCTGAACTAGGTGCAGCTGCTGGATATGCTGACTCTGTCTCAAACCCTACTCATGAGGCAGCTCCAACTGTTGTTGCTGAGTCAGCTGGAGAGGTTGCTCAGGTCAATTCAAACTATGATTTTGGTTATTCTAATGCTGGTGATGGGAATGCATATGCTGGGGATCTTAATTCTATGCCACAGGAAGCCCAATTCACAGCAACGGACAATTCCAAGCAAGCTGCTGGAGTCACTGGTGCTAATGAAGCCGCCAGTGGGAACGAATCTACAGAGTCCATTCAAGTTCCTCCAGTTGTTGAATACAATTCGTCTGTAAATGGTGGTGCTGTGGGTGTAGTTGCAAATGGGAATGCTTTGGAGAACACTGATGGTTCAGCAGCTGATGAGAAACAGCTTGCAGATGGTTATGCTGCCTTGTCTGCTGAAGAAGACCGGCTTTGGAATATTGTAAGAGCTAATTCTTTAGATTTTACTGCTTGGACTTCCTTGATTGAAGAGACAGAGAAGGTGGCAGAGGATAATATCATGAAGATTCGAAGAGTTTATGATGCTTTTCTATCAGAATTTCCCCTATGTTATGGTTATTGGAAGAAATATGCTGATCATGAGGCACGTCTCGGCTCTGTTGATAAAGTTGTTGAAGTTTACGAGCGTGCTGTTCAAGGGGTTACGTATTCGGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACTTATGGGGATCCAGACACAGTGCGTAGGCTTTTTGAACGAGGCTTAGCTTATGTTGGAACAGATTATCTTTCGTTTCCTCTTTGGGATAAGTACATTGAATACGAATACATGCAGCAAGACTGGGCCCGCCTTGCCAATATCTACACCAGAATATTAGAGAATCCAAATCAGCAATTGGATCGTTATTTCAACAGTTTCAAGGAGTTAGCTACAAATCGATCTTTGTCTGAACTACGAACTGCTGATGAAGCTGCTGCAGCGGCAAGTTCTGTTTCAGAGGCTGCTGGCCAAACTGTTGAGGGAGAGGTTCGTTCTGATGGTGCAGAGAATTCCCCAAAACCTGTAAGTGCTGGATTATCAGAAGCAGAGGAGTTGGAGAAGTATATCGCCATAAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCTTACTTTCATGTACGGCCACTTAATGTTGGAGAGCTTGAAAATTGGCATAATTATCTGGATTTTATAGAGAGGGAAGGCGACTTAAGCAAGATTGTCAAGTTGTATGAGAGATGTGTCATTGCGTGTGCCAATTACCCTGAGTACTGGATACGCTATGTTTTGTGTATGGAAGCAAGTGGTAGCATGGATCTTGCAAATAATGTCCTTGCTCGTGCAACTCAAGTCTTTGTCAAGAGACAACCTGAGATACATCTTTTTTGTGCTCGGTTTAAGGAGCAGACTGGAGATATAGCTGGTGCTAGAGCTGCTTATCAACTTGTGCATACTGAAATTTCTCCTGGTCTTCTTGAAGCAATAATTAGGCATGCCAATATGGAACATCGACTGGGAAAGTTGGAGGATGCATTTTCTTTGTATGAACAAGCCATTGCTATTGAGAAAGGAAAAGAACATTCACAAACATTGGCAATGTTGTTTGCTCAGTTTTCTCGATTTGTCTACTTGGCTTCTGGCAATGCAGAAAAGGCAAGACAAATTTTAATTGATGGGATTGAGAACGTTTCAATGTCAAAACCACTACTTGAGGCTTTATTGCATTTTGAGGCTGTTCAGCCCCTGCCAAAGAAAGTTGATACAAACTTTCTGGAATCATTGGTTGTCAAAGTTATAATGCCCAACCCAGAGAGCCCTGGTGTAGCAAGTGCAACTGAGCGTGAGGAACTTTCTAGTATTTTTCTGGAGTTTTTGAATCTCTTTGGAGATGTTCAATCTATCAAGAGGTGCGAGGATAGGCATGCCAAATTGTTCTTGCCACATAGGAGTATGTCAGAGTTGAAAAAACGTCATGCTGAGGATTTCTTAGCTTCAGATAAAACAAAAGTCGCGAGATCGTATTCCGTTCCATCCTCTGCGCAGTCTGTAATGGGTGCCTATCCGAATGCACAGAACCAGTGGACTAATTATGGTGCACAAACTCAAGCTTGGCCGCCAGCCACACAAGCCCAACAATGGACTGCTGGCTACACCCAGCAGCAGGCATCTTATGGGGCTTATGCTGGATATGGTGGCAACTATGCGACTTCACAGTTGCCTGCATCTGTTCCACAAAGTACTGCATACGGAGCCTATCCTCCAGCATATCCTGGACAGCCTCCAGTTCCTCAGCAAAATTATGCACAACCTGCTGTCGCGGCTCCTCCGGCACAGCATCCTGCGGCAGTTCCTCAGGCATACTACGGCAATTATTACTAA 2463 0.4385 MGDSETVAAELGAAAGYADSVSNPTHEAAPTVVAESAGEVAQVNSNYDFGYSNAGDGNAYAGDLNSMPQEAQFTATDNSKQAAGVTGANEAASGNESTESIQVPPVVEYNSSVNGGAVGVVANGNALENTDGSAADEKQLADGYAALSAEEDRLWNIVRANSLDFTAWTSLIEETEKVAEDNIMKIRRVYDAFLSEFPLCYGYWKKYADHEARLGSVDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLANIYTRILENPNQQLDRYFNSFKELATNRSLSELRTADEAAAAASSVSEAAGQTVEGEVRSDGAENSPKPVSAGLSEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASGSMDLANNVLARATQVFVKRQPEIHLFCARFKEQTGDIAGARAAYQLVHTEISPGLLEAIIRHANMEHRLGKLEDAFSLYEQAIAIEKGKEHSQTLAMLFAQFSRFVYLASGNAEKARQILIDGIENVSMSKPLLEALLHFEAVQPLPKKVDTNFLESLVVKVIMPNPESPGVASATEREELSSIFLEFLNLFGDVQSIKRCEDRHAKLFLPHRSMSELKKRHAEDFLASDKTKVARSYSVPSSAQSVMGAYPNAQNQWTNYGAQTQAWPPATQAQQWTAGYTQQQASYGAYAGYGGNYATSQLPASVPQSTAYGAYPPAYPGQPPVPQQNYAQPAVAAPPAQHPAAVPQAYYGNYY* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0125 820 PANTHER PRE-MRNA-PROCESSING FACTOR 39 72 802 - -
Aev06g0125 820 SUPERFAMILY TPR-like 158 323 IPR011990 GO:0005515
Aev06g0125 820 MobiDBLite consensus disorder prediction 72 100 - -
Aev06g0125 820 Gene3D Tetratricopeptide repeat domain 156 328 IPR011990 GO:0005515
Aev06g0125 820 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 72 802 - -
Aev06g0125 820 SUPERFAMILY TPR-like 377 677 IPR011990 GO:0005515
Aev06g0125 820 MobiDBLite consensus disorder prediction 337 367 - -
Aev06g0125 820 Gene3D Tetratricopeptide repeat domain 410 713 IPR011990 GO:0005515
Aev06g0125 820 SMART hat_new_1 215 247 IPR003107 GO:0006396
Aev06g0125 820 SMART hat_new_1 430 462 IPR003107 GO:0006396
Aev06g0125 820 SMART hat_new_1 575 607 IPR003107 GO:0006396
Aev06g0125 820 SMART hat_new_1 287 320 IPR003107 GO:0006396
Aev06g0125 820 SMART hat_new_1 181 213 IPR003107 GO:0006396
Aev06g0125 820 SMART hat_new_1 250 285 IPR003107 GO:0006396
Aev06g0125 820 SMART hat_new_1 534 569 IPR003107 GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0125 Aev-Chr6 991622 998189 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0125 K13217 - gmx:100787373 1264.98