Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0100 ATGCAAGGGACCCAAGTTAGGTCTCTTTCATGTCACAAAGCAGAGCAATCTACCCAAGAAGAAATAGTTTCCATTTTCATTGGAATGGATAAACTACCAGTGACCATGTATCTTCAGTTTTACATAAACGACAATGGTGACAAAGTGTATACCACTAAGAAAGAGTCACCAGTTGGATTAGCTACACAGTCTGCTCATCCAGCTCGGTTCTCACCTGATGACAAATATTCAAGGCAGAGAGTGCTTCTGAAGAAGCGTTTTGGATTGTTACCAACCCAGCAGCCACCACCAAATGAATGCAGAGTCTACTCTCAACTTCTCTCTCTCACACTCTCATCGACTGAAGCCAAAATCGTCGTCGCATGCGAAGCGATGTCGCTTCTTCCGCGAATGGCCTCAAACCTAGCTAGATTACTGTTTCTGCTACTTCTTACTTTTTCGATCTGTGAAGCCGCCGCGATCCCCGCTCCAATCTCTGATTCCCACCGTTCCGCTGCCTTAGAGCTCTTCGTACCTCCCCATGGTTCTTTCGCAAGTTTAGAAGAAGCCTATGAGGCCCATAGAGTTTTCGAGATTCTTGCGATTGGGGAGAAGCCTGATTTGAGCAAAACCACATGTCAGAAGGTCTTGGAAAATCTTGGATCGTCGACCCCTCTGAAGGATTTGTTCTATGCCTTCAAAGTTAATGGCATATTGAAATGCAAGGTTAATGGGGACGTTTTCAAGGATACTGCTTCAAGACTTAAAGCTACCCTCAACGATGCAAGTACTTTGGTTGACATATACTACTCAATTGGAAGTTTGGTTCTAATAAAGGATCAGGCTTCTGATGTTGATGTGCTTCTTGCTGATGCTGATGGGACCTTTCATTCAATCAAGGCTTTGAGCCAAAGTGATGGAAGATGGCGCTACAGTTCTGATAATCCAGAGTCTAGTACCTATGCTGCTGGATTAGCACTTGAAGCACTGGCTGGAGTGATCACATTAGCGTCTTCCGAAGTTGATCAGTCTAGGGTCAATGCAGTGAAAAGTGATATATTGAAGCTCTTTGACAGCATTGAGAAATATGATGATGGAACCTTCTATTTTGATGAGAAATTCATTGCTGGACGTGAGCATCAAAGCTCTATCTCCACAACTTCTTCAGTTGTTCGAGGGGTTACTGCATTTGCTGCTGTAATTCCTGGAAAAATAAATCTTCCTGGGGATAAAATATTGGGTTTAGCAAAATTTTTGCTGGGCATTGGAATCCCAGGAGATACCAAAGACTTCTTCAATCAAGTTGAATCATTAGCTTTTCTAGAGAGCAACAGGATTTCCATCCCATTAGTGTTGTCACTCCCTACAACTGTTTATTCATTGTCCAACAAAGATCAGCTCAAGGTTAGGGTAAATACAGTACTTGGCTCAGCTGCTCCACCTTTAACAGTTAAGCTTGTCCGGGCTTTCAGCACTGGTGCTAAAGAGCCAGCCATTATTGAGAATAAGGAGCTCCAATATGACCAAAATAGTGGACTTCATGTCTTGGATGTTTTCCCAGATAAACTGGATGTGGGAACATATGTGTTTGTTTTTGAGATTGTGCTTGATGATTCTGCTGGAGAAAAAGTTTATGCTACTGGAGGTCAAATTCATGTGCCAATATATATCACTGGGATTATTAAAGTTAGCAACGCAGAGATTGCAGTTCTGGACAGTGATCTTGGAAGTGTTGAGACCCAGAAAACGTTAGACTTGGCTGGAGATGACATTGTTTCACTCTCAGCTAACCACCTGCAAAAATTTCGTTTCTCTTTCCAATTGACAACACCTCGTGGTCACGCTTTTAAGCCTCATCAGGCATTTTTCAAGTTGAAGCATGAGACGAAGTATGAACACATCTTTGTTGTTGGAAATACTGGCAAGAAGTTTGAGATTATTCTTGACTTTCTTGGCTTGGTGGAGAAATTTTATTATCTTTCGGGCAGATATGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTACGGTTACTAGGCCATGTTGAATTAGATCTTCCTGAAGCACCAGAAAAGGCACCCCGTCTTCCTCCACTACCTGTTGATCCTTACTCAAAATATGGGCCCAAAACAGAGATAACCCACTTATTCAGGGCTCCTGAAAAGCGACCACCCCTGCAACTCTCTCTTACTTTCTTGGGTTTGACCCTTTTGCCCTTCATTGGCTTTTTGGTTGGGCTATTACGCTTGGGGGTAAACTTCAAGAATTTCCCTTCTTCAGCAGTACCAGCTCTATATGCCATATTGTTCCATCTTGGCATTGCTGCAGTTCTTTTGGTTTATGTGCTCTTTTGGTTGAAGCTGGACTTGTTCACTACACTCAAAACAGTAGCTCTTTTGGGGGCTTTTCTGATGTTTGTGGGACACAGAATTCTTTCCCATCTTGCTACATCATCAGCCAAGTTGAAGTCTGCATGA 2469 0.4281 MQGTQVRSLSCHKAEQSTQEEIVSIFIGMDKLPVTMYLQFYINDNGDKVYTTKKESPVGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPNECRVYSQLLSLTLSSTEAKIVVACEAMSLLPRMASNLARLLFLLLLTFSICEAAAIPAPISDSHRSAALELFVPPHGSFASLEEAYEAHRVFEILAIGEKPDLSKTTCQKVLENLGSSTPLKDLFYAFKVNGILKCKVNGDVFKDTASRLKATLNDASTLVDIYYSIGSLVLIKDQASDVDVLLADADGTFHSIKALSQSDGRWRYSSDNPESSTYAAGLALEALAGVITLASSEVDQSRVNAVKSDILKLFDSIEKYDDGTFYFDEKFIAGREHQSSISTTSSVVRGVTAFAAVIPGKINLPGDKILGLAKFLLGIGIPGDTKDFFNQVESLAFLESNRISIPLVLSLPTTVYSLSNKDQLKVRVNTVLGSAAPPLTVKLVRAFSTGAKEPAIIENKELQYDQNSGLHVLDVFPDKLDVGTYVFVFEIVLDDSAGEKVYATGGQIHVPIYITGIIKVSNAEIAVLDSDLGSVETQKTLDLAGDDIVSLSANHLQKFRFSFQLTTPRGHAFKPHQAFFKLKHETKYEHIFVVGNTGKKFEIILDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLRLLGHVELDLPEAPEKAPRLPPLPVDPYSKYGPKTEITHLFRAPEKRPPLQLSLTFLGLTLLPFIGFLVGLLRLGVNFKNFPSSAVPALYAILFHLGIAAVLLVYVLFWLKLDLFTTLKTVALLGAFLMFVGHRILSHLATSSAKLKSA* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0100 822 Pfam Nucleolar RNA-binding protein, Nop10p family 38 87 IPR007264 GO:0001522|GO:0030515|GO:0042254
Aev06g0100 822 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 127 822 - -
Aev06g0100 822 SUPERFAMILY Nop10-like SnoRNP 38 93 IPR036756 GO:0001522|GO:0030515|GO:0042254
Aev06g0100 822 Pfam Oligosaccharyltransferase subunit Ribophorin II 138 814 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aev06g0100 822 PANTHER RIBOPHORIN II 127 822 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aev06g0100 822 Gene3D H/ACA ribonucleoprotein complex, subunit Nop10 45 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0100 Aev-Chr6 830208 841809 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0100 K12667 - gmx:100780415 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0100 06 830208 841809 Aev02g0815 02 7030989 7038794 PCT