Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0053 ATGGCATCCATCTTTGCTAGCACCACAACACCATCGATCACCTGCGCAGGTCTTGTCCACAGGAGACCTCTTGGTGTCTCTTCCTCTACCGTTCTTGGGTTGCCGGCAATGGGTAAGGTGGGAAGAGTGAGGTGCTCCATGGAGGAAGGAAAGGGTGGTGTGAGTGAAAGCAAGAGCTCAAAGATGGGGATGGGGGCATCCCTGATGGCTGCTGCTGTGGCTGCAAGCATGTCGAGCCCTGCCGCCATGGCTCTGGTGGATGAGAGGCTGAGCACTGAAGGAACAGGACTTCCTTTTGGTCTCAGCAACAACCTCCTTGGTTGGATCCTCTTCGCTGTCTTTGGTCTTATCTGGGCTCTTTACTTTGTCTACACTGCCGATCTTGAAGAGGATGAAGAATCTGGATTGTCCCTCTGA 417 0.5348 MASIFASTTTPSITCAGLVHRRPLGVSSSTVLGLPAMGKVGRVRCSMEEGKGGVSESKSSKMGMGASLMAAAVAASMSSPAAMALVDERLSTEGTGLPFGLSNNLLGWILFAVFGLIWALYFVYTADLEEDEESGLSL* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0053 138 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 138 - -
Aev06g0053 138 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 138 IPR009806 GO:0009507|GO:0009523|GO:0015979
Aev06g0053 138 Pfam Photosystem II reaction centre W protein (PsbW) 1 138 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0053 Aev-Chr6 434730 435276 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0053 K02721 - gmx:100526966 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0053 06 434730 435276 Aev02g0726 02 6037054 6037743 PCT