Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0033 ATGAAAGAAGACAATGAGTTCAGCTCAGTACCAAAGGAAAAAGAGATTCCGTTCTTCTTCTGCTACTCCTTCAGCAAGACGCGAATTTGGGCCTTGCACCCTCGCAACCCAGTTTATGTCGGCCCAATGGGCCAGGCTGAGCTCATTTGCCCTGAAGATCGAGCAAATAATAATATGGCACCCGATGCACTGTCCGAAGATCAGATTGGTGAATTCAAAGAAGCCTTTGGCCTCATTGACAAGGACTGTGATGGATTCATAACTATGGAGCAATTGGCAACCATTATCCGATCATTAGATGGGAATCCAACAAAAGAAGAAGTCCAAAATATGATATGTGAAGTAGACATTAATGGGAATGGGAGAATAGATTTTGAAGAGTTCTTGAATATTATGAACAGAAAAATGAAGGAGAATATGGCTGAGGAGCTAAAAGAAGCATTCAAAGTATTTGACAGAGATCAAGATGGATACATATCAGCCACTGAGTTAAGACAAGTAATGATGAACATGGGAGAGAGACTAACAGTTGAAGAGGCTGAACAGATGATCAAAGAAGCAGATTTGGATGGGGATGGTAAAGTTAGCTATGAAGAGTTTGCAAGAATGATGATACTCCATTAA 624 0.4071 MKEDNEFSSVPKEKEIPFFFCYSFSKTRIWALHPRNPVYVGPMGQAELICPEDRANNNMAPDALSEDQIGEFKEAFGLIDKDCDGFITMEQLATIIRSLDGNPTKEEVQNMICEVDINGNGRIDFEEFLNIMNRKMKENMAEELKEAFKVFDRDQDGYISATELRQVMMNMGERLTVEEAEQMIKEADLDGDGKVSYEEFARMMILH* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0033 207 ProSiteProfiles EF-hand calcium-binding domain profile. 139 174 IPR002048 GO:0005509
Aev06g0033 207 ProSiteProfiles EF-hand calcium-binding domain profile. 103 138 IPR002048 GO:0005509
Aev06g0033 207 SUPERFAMILY EF-hand 61 205 IPR011992 -
Aev06g0033 207 Gene3D - 141 204 - -
Aev06g0033 207 PANTHER CALMODULIN-LIKE PROTEIN 9 61 205 - -
Aev06g0033 207 ProSitePatterns EF-hand calcium-binding domain. 188 200 IPR018247 -
Aev06g0033 207 Pfam EF-hand domain pair 142 204 IPR002048 GO:0005509
Aev06g0033 207 Pfam EF-hand domain pair 72 132 IPR002048 GO:0005509
Aev06g0033 207 ProSitePatterns EF-hand calcium-binding domain. 152 164 IPR018247 -
Aev06g0033 207 SMART efh_1 179 207 IPR002048 GO:0005509
Aev06g0033 207 SMART efh_1 143 171 IPR002048 GO:0005509
Aev06g0033 207 SMART efh_1 71 99 IPR002048 GO:0005509
Aev06g0033 207 SMART efh_1 107 135 IPR002048 GO:0005509
Aev06g0033 207 ProSiteProfiles EF-hand calcium-binding domain profile. 175 207 IPR002048 GO:0005509
Aev06g0033 207 PRINTS Recoverin family signature 135 154 - -
Aev06g0033 207 PRINTS Recoverin family signature 111 132 - -
Aev06g0033 207 PRINTS Recoverin family signature 157 175 - -
Aev06g0033 207 ProSiteProfiles EF-hand calcium-binding domain profile. 67 102 IPR002048 GO:0005509
Aev06g0033 207 PANTHER CALCIUM BINDING PROTEIN 61 205 - -
Aev06g0033 207 CDD EFh 143 204 IPR002048 GO:0005509
Aev06g0033 207 Gene3D - 47 140 - -
Aev06g0033 207 ProSitePatterns EF-hand calcium-binding domain. 116 128 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0033 Aev-Chr6 304457 307814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0033 61 205 EF-hand Containing Proteins AT3G56800 63.014 1.19e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0033 K02183 K13448 tcc:18613263 238.81