Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0016 ATGGGGCCAGATATCCCTTTTGTTTTGTGTTTCATGGTTTCTAGTTGCAATTATAGCGTACCCCAAGTTCCCAACAACAGAAATCACCTTTCTATTGTTAATTCTATTAGCCCTTGTTTAGCTTATTCAAGGTCACAAGCTGTTCTACTGGGATTAGAGAATAAAGTCACCCTTCAGCGACTATTTTTCTCGAGTATGGCTGAAACAATCTTGGTCCAGGCTCAAGACCCAGCTAAATTAACCATGGAAATAGAAAATGCTATTACTGAGAATCAATTCGATTATTCATGGAAGTTACTTGAGCAGCTTATGCACATGGAGGGGTTTCCTAGAAAGTCTGTCTTCAGCAAGCTTGTAACCAGTTACGTCGAAGGCCTTGACGTGAAATGGCTAGAAAAGGCTTATGAATTGGTGGAACGAGCTGTGGAGGAAGGTAAACAAAATTTGTTGGAAAAAGAGGTGCTTATTTACCTCAGCTTTGGCCTTGCAAAAGCTGGACTACCTGTTCCGGCATCGACTGTTTTGAGAAAAATGATAGATATGGAACTTTTCCCTCCAGTCACTGCTTGGTCTGCTGTTTTGGCCCACATGTCACAGACAGCAGAAGGAAGTTACCTTGCAGCTGAGTTGATTCTTGAAATAGGCTATTTGTTCCAGAACAACAGAGTTGATCCGCGTAAAAAGAGCAATGCTCTTTTGATTGCGATGAAGCCTAACGCTAATGCTTTTAACATTGCTTTGGCGGGGTGTCTCTTGTTTGAGACATCTAGGAAGGCTGAGCAGCTTCTTGATATGATGCCTGGAATTAGTGTCAAAGCTGATGCAAACTTACTGATAATTATGGCACATGTATATGAGAAAAATGGGCGAAGAGAAGATCTTAAGAAGCTGCAGAGGCATGTAGAGGAAGCTCCGAATCTAACTGATATTCAATTCCGACAATTCTATAATTGTTTGCTCACATGCCATTTGAAACTTGGGGATCTGGATTCTGCATCAAATATGGTTTTGGAAATGCTTAGGAAAGCGAAGGAAGCAAGAAATTCTCTTGCTGCTTCCAAATTTGTGATCAATGCAGCAAAAACTAATAATGACCATTCTCCTGGACCGGCTTCTCTACAGAGTTTGAGAAACACTAAGGGTTTAGATAGTTTGGAAAATAACAAGCCACTACGGAATGCTGTCTTATGTTATGGGGAGTTCTCCAAAGATCAGAATTTCTTAAAACTTGAAGCAGAGTCAAAAGTTGTTCTTGAATCTTTATTAGCTAAATTACATAAGCAAGTTGACTTGATTACAACTGAACACGGTATTCTTCAACCTACTGAAACAATTTATGTGAAACTAGTTAAAGCTTTTCTAGAGGCCGGCAAGACGAAGGATCTGGCAGTGTTTCTTCTCAAGGCAGAAAGGGAAGACTTCCCATTTTCCAATGATAATTCAGCCTTGGTTCATGTCATTAATTCATGCATTTCACTTGGATGGTTGGTTCAAGCACATGACCTCCTTGATGAGATGCGTCTAGCCGGAGTTAGAACTGGTTCTTCTGTATATGCCTCCCTTTTGAAAGCATATTGTGGAGCAAATAGGGCTGCAGATGTTACATCACTATTGAGAGACGCCCAGAAGGCTGGTATCCAGCTTGACTCAAGCTGTTATGAAGCAATGATCGAATCCAGGGTAATTCAGCAAGATACACATGGAGCTCTCCAACTATTTAAAGAGATGAAAGAAGCTAGGATTCCGAAAGTTAGTCAAAGTGGTGCAGAGACGGATGAAGCCGGGCTGACGACAAAGCTGTTACAGGAAATCAAGGAAGGACAGAGAGTGGATTATGGAGTTCATGACTGGAACAATGTAATCCACTTTTTCTGTAAGAAGAGACTGATGCAGGATGCAGAAAAGGCTCTGAAGAAGATGAGAAGCTTAGGCCACACGCCGAATGCACAAACTTTCCATTCTATGGTCACTGGGTATGCTGCAATTGGAGGCAAATATATTGAGGTGACAGAGCTGTGGGGTGAGATGAAATCTCTTGCTTCTGCTATCTCAATGAAGTTTGATCAGGAACTTCTCGATTCTGTGCTGTATACTTTTGTGAGGGGTGGATTCTTCGTTCGTGCAAATGAAGTTGTCGCGATGATGGAAAAAGGAAACATGTTTGTTGACAAGTACAAGTACAGAATGCTATTCTTGAAATATCACAAAACACTTTACAAAGGCAAGGCTCCAAAATTTCAGACGGAATCCCAACTGAGCAAAAGAGAAGCAGCATTGGCTTTTAAAAGATGGGTAGGCTTGAATTGA 2307 0.4122 MGPDIPFVLCFMVSSCNYSVPQVPNNRNHLSIVNSISPCLAYSRSQAVLLGLENKVTLQRLFFSSMAETILVQAQDPAKLTMEIENAITENQFDYSWKLLEQLMHMEGFPRKSVFSKLVTSYVEGLDVKWLEKAYELVERAVEEGKQNLLEKEVLIYLSFGLAKAGLPVPASTVLRKMIDMELFPPVTAWSAVLAHMSQTAEGSYLAAELILEIGYLFQNNRVDPRKKSNALLIAMKPNANAFNIALAGCLLFETSRKAEQLLDMMPGISVKADANLLIIMAHVYEKNGRREDLKKLQRHVEEAPNLTDIQFRQFYNCLLTCHLKLGDLDSASNMVLEMLRKAKEARNSLAASKFVINAAKTNNDHSPGPASLQSLRNTKGLDSLENNKPLRNAVLCYGEFSKDQNFLKLEAESKVVLESLLAKLHKQVDLITTEHGILQPTETIYVKLVKAFLEAGKTKDLAVFLLKAEREDFPFSNDNSALVHVINSCISLGWLVQAHDLLDEMRLAGVRTGSSVYASLLKAYCGANRAADVTSLLRDAQKAGIQLDSSCYEAMIESRVIQQDTHGALQLFKEMKEARIPKVSQSGAETDEAGLTTKLLQEIKEGQRVDYGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHTPNAQTFHSMVTGYAAIGGKYIEVTELWGEMKSLASAISMKFDQELLDSVLYTFVRGGFFVRANEVVAMMEKGNMFVDKYKYRMLFLKYHKTLYKGKAPKFQTESQLSKREAALAFKRWVGLN* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0016 768 TIGRFAM PPR: pentatricopeptide repeat domain 617 649 IPR002885 -
Aev06g0016 768 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 613 647 IPR002885 -
Aev06g0016 768 Pfam PPR repeat family 615 660 IPR002885 -
Aev06g0016 768 PANTHER OS10G0422566 PROTEIN 12 767 - -
Aev06g0016 768 Pfam Pentatricopeptide repeat domain 536 581 IPR002885 -
Aev06g0016 768 Gene3D Tetratricopeptide repeat domain 161 431 IPR011990 GO:0005515
Aev06g0016 768 Gene3D Tetratricopeptide repeat domain 589 764 IPR011990 GO:0005515
Aev06g0016 768 Gene3D Tetratricopeptide repeat domain 471 588 IPR011990 GO:0005515
Aev06g0016 768 Pfam PPR repeat 316 342 IPR002885 -
Aev06g0016 768 Pfam PPR repeat 486 511 IPR002885 -
Aev06g0016 768 PANTHER BNAC05G43320D PROTEIN 12 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0016 Aev-Chr6 111677 113983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0016 486 730 Miscellaneous Gene Families AT4G11690 20.816 2.70e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0016 - - gmx:102661989 1241.1