Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0013 ATGGCACCAAGAAGGACTATTGAGATGATGGTGGTGGTGTTGATGAGTAGAATGTTTTTTCTTTGGGGAGAAACAGAACTAGTAATGGCTCAGAATTCTGAATCAAGTTGCACCAATGTGCTTCTGAGCCTTTCACCTTGCCTTGACTACATAACAGAGAAGGCATCAACACCTTCCTCTGAGTGCTGCTCTCAACTTGCATATGTGGTGGGGTCACAGCCACAGTGCCTATGTGAGGTTGTTAATGGTGCTGCTTCATCAATTGGTGCTACCCTCAACATCAATCAGACTCAGGCTTTGGCACTCCCTACTGCCTGCAGAGTTCAGACACCTCCAATTAGCATATGCTCTACCACAGGCTCATCAGTTTCATCTCCAACAGGGGTTTCTGTTTCCAACATTCCAAATTCCCCTGCAGCGTGCCGTTTCCGTGCAACTCATCTCATCCCATCCCTCCCTCGCACCCAATTCCCCACCTCTTCTTCTCTCTCGCGGTTCTCTTCTTTCTTCGCTACCAGATCAATCGTCAGTCAGTATTCTCTTCATCTTTGTGTTTGCTTTGAAGCATCAGGTCTCTCTGACCTTGGTATTCCCTTTGCTGATGATTCATCAGTTCTTCCTTTCTATCTTACCTGTGCTGCTCTATCATTGGAGATTGACATTTAG 666 0.464 MAPRRTIEMMVVVLMSRMFFLWGETELVMAQNSESSCTNVLLSLSPCLDYITEKASTPSSECCSQLAYVVGSQPQCLCEVVNGAASSIGATLNINQTQALALPTACRVQTPPISICSTTGSSVSSPTGVSVSNIPNSPAACRFRATHLIPSLPRTQFPTSSSLSRFSSFFATRSIVSQYSLHLCVCFEASGLSDLGIPFADDSSVLPFYLTCAALSLEIDI* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0013 221 PRINTS Plant phospholipid transfer protein signature 36 52 IPR000528 GO:0006869|GO:0008289
Aev06g0013 221 PRINTS Plant phospholipid transfer protein signature 57 71 IPR000528 GO:0006869|GO:0008289
Aev06g0013 221 PRINTS Plant phospholipid transfer protein signature 93 110 IPR000528 GO:0006869|GO:0008289
Aev06g0013 221 SMART aai_6 37 116 IPR016140 -
Aev06g0013 221 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 12 159 IPR043325 -
Aev06g0013 221 Gene3D - 34 114 IPR036312 -
Aev06g0013 221 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 36 122 IPR036312 -
Aev06g0013 221 Pfam Probable lipid transfer 29 116 IPR016140 -
Aev06g0013 221 PANTHER LIPID TRANSFER PROTEIN 12 159 - -
Aev06g0013 221 CDD AAI_LTSS 44 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0013 Aev-Chr6 92384 100610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0013 7 118 Lipid Metabolism Gene Families AT3G22600 51.786 4.34e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0013 - - adu:107493010 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0013 06 92384 100610 Aev06g0013 06 92384 100610 ECH
Aev02g0669 02 5286717 5287768 Aev06g0013 06 92384 100610 PCT