Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0011 ATGGAAGAAGCAGAAGCTGAATCCAACAGAGACGTTGAAGTTGCTCCCGCACTCATCGCCGTTCACCCCGACCGAACTTCCGTCGCCGTCGCTGTAGGACCAGACCTCCGCGTCTTCGACCTTCTTGCTGGTTCCGCAGCTTCCTTAGTTGACGACACCGGTGCACCCTTCCACAAAGACTCAATCAGAGCCATTCGATTCGGAGCTAAAGGAAAACTCTTCGTATCCGCCGGTGATGATAAAACCGTCAAGGTCTGGTCGCCGCAATCTTGGCGCTGCATCTGCACCGTGTCATCGGAAAAGAGGGTGAGTGCAGTTGCAATAAACAATGATGGTTCCTATGTGTGTTTCGCTGACAAGTTTGGGGTTGTGTGGGTTGTGGATCTCGCTGGGTTTGATGGTAATCAACCATTAGGTGATAAGAAAGCGATGCCACTTCTTTCTCACTATTGCAGCATCATCACTAGCTTGGAATTTTCCCCTGATGGCCGGTTTATTTTAAGTGCTGATCGGGATTCTAAAATTCGGGTTACTAATTTTCCCAAGAAGCCCTTAAATGGAGCTCAAGAGATACAAAGTTTCTGCCTTGGTCATACAGAGTTTGTGTCCCGCCTTGCTTTCATTCACACACAGGAATGCCCTCAAGGCCTTCTTCTCTCTGGCAGTGGTGATTCAACAGTCCGATTGTGGGATATCACTTCTGGCGCCTTATTAGATACTTGTGAGGTTGCAGTTAAGGCAGAACTTTTAGATTCTAATGGTCAAGCAGAGGAGGAGCATGGTCATGCTATTACTGATTTATGCACCATCCAAGATGGTTTACTTGTTGCCGTGGCCATTCAGAGTTTGCAAGGAATAGTATTGTTGAGCTGCAATATTTCTTCCAAAGAACTTTCTGTTGCCAAGGTGGTTTCTATTGCTGGAGAGGCATTTGTCCCTACCTGCTTAGGGTACATCCCCTCTACAAGGGAATTGTGGATGGTAACAGGTGTGTCTAGTCTACCTGGTAGTAGTCACCCTTCTCTGGCTCGCGTCCGCGTAATTTCTGGTATTGACGTCGAGGAAGAGCCAGCTGTTCTTGGAGATGACAGGATACCTTGGGGAGAAAAACTGCTGGAAACGTTGCAGGGAACTGCGTCCGTTGATGAGAGTGCATATTTGGCAGCTGCAGAAGCTGTTAAAACAGCAATGTGCAACCTGTTGATTAAAAAGCAATACTCTGCAGATAATAGAGAATCTAGGAAGAAAACCAGAAATGATAGAAAACTGAAAATGTAA 1278 0.4679 MEEAEAESNRDVEVAPALIAVHPDRTSVAVAVGPDLRVFDLLAGSAASLVDDTGAPFHKDSIRAIRFGAKGKLFVSAGDDKTVKVWSPQSWRCICTVSSEKRVSAVAINNDGSYVCFADKFGVVWVVDLAGFDGNQPLGDKKAMPLLSHYCSIITSLEFSPDGRFILSADRDSKIRVTNFPKKPLNGAQEIQSFCLGHTEFVSRLAFIHTQECPQGLLLSGSGDSTVRLWDITSGALLDTCEVAVKAELLDSNGQAEEEHGHAITDLCTIQDGLLVAVAIQSLQGIVLLSCNISSKELSVAKVVSIAGEAFVPTCLGYIPSTRELWMVTGVSSLPGSSHPSLARVRVISGIDVEEEPAVLGDDRIPWGEKLLETLQGTASVDESAYLAAAEAVKTAMCNLLIKKQYSADNRESRKKTRNDRKLKM* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0011 425 Hamap tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit <gene_name> [WDR4]. 25 417 IPR028884 GO:0036265
Aev06g0011 425 Gene3D - 52 309 IPR015943 GO:0005515
Aev06g0011 425 ProSiteProfiles Trp-Asp (WD) repeats profile. 195 240 IPR001680 GO:0005515
Aev06g0011 425 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 55 87 - -
Aev06g0011 425 Pfam WD domain, G-beta repeat 148 177 IPR001680 GO:0005515
Aev06g0011 425 Pfam WD domain, G-beta repeat 195 231 IPR001680 GO:0005515
Aev06g0011 425 Pfam WD domain, G-beta repeat 58 87 IPR001680 GO:0005515
Aev06g0011 425 PANTHER WD40 REPEAT PROTEIN 4 17 422 IPR028884 GO:0036265
Aev06g0011 425 SMART WD40_4 90 128 IPR001680 GO:0005515
Aev06g0011 425 SMART WD40_4 46 87 IPR001680 GO:0005515
Aev06g0011 425 SMART WD40_4 187 231 IPR001680 GO:0005515
Aev06g0011 425 SMART WD40_4 140 179 IPR001680 GO:0005515
Aev06g0011 425 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 195 235 - -
Aev06g0011 425 ProSiteProfiles Trp-Asp (WD) repeats profile. 55 87 IPR001680 GO:0005515
Aev06g0011 425 ProSitePatterns Trp-Asp (WD) repeats signature. 218 232 IPR019775 -
Aev06g0011 425 ProSiteProfiles Trp-Asp (WD) repeats profile. 147 177 IPR001680 GO:0005515
Aev06g0011 425 SUPERFAMILY WD40 repeat-like 19 278 IPR036322 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g0011 58 381 Miscellaneous Gene Families AT5G08390 22.581 1.22e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0011 K15443 - gmx:100786310 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0011 06 86607 89102 Aev06g0011 06 86607 89102 ECH