Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3530 ATGTCTTTGCTCTCAGATCTCGTCAACCTCAACCTCTCTGACTCCACCGAAAAGATTATTGCTGAATACATATGGATTGGTGGATCTGGCATGGACATCAGAAGCAAAGCCAGGACACTTTCTGGACCAGTGAATGACCCTTCAAAACTCCCCAAGTGGAACTATGATGGTTCAAGCACAGGTCAAGCTCCTGGTGAAGACAGTGAAGTTATCCTATACCCACAAGCTATATTCAGGGACCCATTTAGGAGAGGCAAGAATATTCTTGTGATTTGTGATTGTTACACCCCAGCTGGAGAGCCAATCCCCACAAACAAGAGGCACAATGCTGCCAAAATCTTCAGTCACCCTGATGTTTCTGCTGAGGAACCATGGTATGGAATTGAGCAAGAGTACACCTTGTTACAGAAAGACACTAACTGGCCTCTTGGGTGGCCAATTGGTGGGTACCCTGGACCACAGGGACCATACTACTGTGGGATTGGTGCTGATAAAGCTTATGGGCGTGACATTGTAGATGCACATTACAAAGCTTGTCTTTATGCTGGCATCAACATTAGTGGCATCAATGGAGAAGTTATGCCTGGCCAGTGGGAATTCCAAGTTGGTCCTGCTGTTGGCATCTCTGCTGCAGATGAGATATGGGCTGCTCGCTACATTCTTGAGAGGATCACAGAGATTGCTGGAGTGGTTGTTTCATTTGACCCCAAGCCTATTAAGGGAGACTGGAATGGTGCTGGTGCTCACACAAACTACAGCACAAAGTCGATGAGGAATGAGGGAGGATATGAGGTGATAAAGAAGGCAATTGAAAAGCTTGGATTGAGGCACAAAGAGCACATTGCTGCTTATGGAGAAGGCAATGAGAGGCGTCTCACTGGAAGGCATGAAACTGCAGACATTCACACCTTCTCTTGGGGTGTGGCCAACCGTGGAGCCTCAGTTAGAGTTGGAAGGGACACAGAGAAAGAAGGAAAAGGTTACTTTGAGGACAGAAGGCCAGCTTCTAACATGGACCCCTATGTTGTCACCTCCATGATTGCTGAGACTACCATCCTCTTGAAGTAG 1068 0.4719 MSLLSDLVNLNLSDSTEKIIAEYIWIGGSGMDIRSKARTLSGPVNDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRRGKNILVICDCYTPAGEPIPTNKRHNAAKIFSHPDVSAEEPWYGIEQEYTLLQKDTNWPLGWPIGGYPGPQGPYYCGIGADKAYGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAADEIWAARYILERITEIAGVVVSFDPKPIKGDWNGAGAHTNYSTKSMRNEGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADIHTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILLK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3530 355 SUPERFAMILY Glutamine synthetase, N-terminal domain 14 102 IPR036651 GO:0004356|GO:0006542|GO:0006807
Aev05g3530 355 Pfam Glutamine synthetase, beta-Grasp domain 22 97 IPR008147 GO:0004356|GO:0006542|GO:0006807
Aev05g3530 355 Gene3D - 1 103 IPR036651 GO:0004356|GO:0006542|GO:0006807
Aev05g3530 355 SUPERFAMILY Glutamine synthetase/guanido kinase 103 351 IPR014746 GO:0003824
Aev05g3530 355 ProSitePatterns Glutamine synthetase putative ATP-binding region signature. 237 253 IPR027303 -
Aev05g3530 355 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 19 99 IPR008147 GO:0004356|GO:0006542|GO:0006807
Aev05g3530 355 SMART Gln_synt_C_2 103 351 IPR008146 GO:0004356|GO:0006807
Aev05g3530 355 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 106 355 IPR008146 GO:0004356|GO:0006807
Aev05g3530 355 Pfam Glutamine synthetase, catalytic domain 123 254 IPR008146 GO:0004356|GO:0006807
Aev05g3530 355 PANTHER GLUTAMINE SYNTHETASE 1 354 - -
Aev05g3530 355 PANTHER GLUTAMINE SYNTHETASE 1 354 - -
Aev05g3530 355 ProSitePatterns Glutamine synthetase signature 1. 55 72 IPR027302 -
Aev05g3530 355 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 104 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3530 Aev-Chr5 34495823 34500151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3530 K01915 - csv:101221473 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3530 05 34495823 34500151 Aev05g3530 05 34495823 34500151 ECH