Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3481 ATGGGGAGCCCTGGATTGAGCAATCGCAATAATGGTCATCAAAGATTAGGCATAACTGAGCCTATTTCATTGGCTGGACCAACTGAGGATGATGTGATCAAGACCCGTGAGCTTGAGAAGTATTTGCAAGATGTTGGATTGTATGAGAGTCAGCAAGAGGCAGTGGTTAGAGAGGAAGTGCTTGGCAGGCTAGACCAGATTGTGAAGATTTGGGTTAAAGCCATCAGCAGGGCGAGAGGACTCAATGAACAACTGGTGCAAGAAGCAAATGCCAAGATTTTCACCTTTGGCTCCTACAGGCTAGGGGTGCATGGCCCTGGAGCTGATATAGACACTCTTTGTGTAGGGCCCAGACACGCAACCAGAGAAGAAGATTTCTTTGGTGAGCTACAAAAGATGCTATCTGAGATGCCAGAAGTTACAGAGTTGCGCCCTGTGCCCGATGCTCACGTCCCTGTGATGAACTTCAAGTTCAATGGTGTTTCTGTAGATCTCCTTTATGCAAGATTATCTTTGTGGGTTATTCCTGAAGACTTAGATATATCACAAGAGTCAATATTACAAAATGCAGATGAACAAACTGTTCTTAGTCTTAATGGTTGCAGAGTAACTGATCAAGTCCTACGTTTGGTTCCTAATATTCAGAGTTTTCGCACAGCGTTGAGATGCATGAGGTTTTGGGCAAAGCGCCGTGGTGTTTATTCAAATGTTTCAGGTTTTCTTGGTGGTATAAACTTGGCATTGCTTGTCGCCCGAATATGCCAGCTATACCCTAATGCACTGCCTAATATGTTAGTGTCTCGATTTTTTAGGGTATATACTCAATGGCGATGGCCTAATCCAGTTATGCTTTGTGCTATTGAAGAGGGATCACTTGGACTTCCTATTTGGGATCCTAGAAGAAATCCTAGGGATAGATATCATCTAATGCCTATAATTACTCCTGCTTATCCTTGCATGAACTCTACCTACAATGTGACATCAAGTACATTGCGTATTATGTCAGAGGAATTTCAGAGGGGAAGTGAAATATGTGAGGCAATGGAAGCTAGCAAGGCTGATTGGGATACACTTTTTGAGCCTTATCCCTTTTTTGAAGCTTACAAGAATTATCTACAGATGGACATTACAGCAGAGAATGTCGATGATCTTAGAAAATGGAAAGGCTGGGTTGAGTCTCGCCTCCGCCAGTTGACACTCAAGATTGAGAGGCACACTTATGGCATGCTTCAGTGTCATCCATATCCTGGTGCATTTTCAGACAAATCCCGACCTTTCCACCATTGTTACTTTATGGGACTGCAGCGTAAGCAAGGGGTTCCAGTGAATGAAGGTGAACAATTTGATATAAGGCTAACTGTTGACGAATTTAAGCACTCTGTCAATGCATACACTCTATGGAAACCTGGAATGACTATCTATGTTTCCCATGTGAAACGACGTAATATACCTAACTTTGTATTTCCTGATGGTATCCGACCTTCCCACACTTCTAAAGTAACCTGGGACAGTAAACGAAGCTCAGAAATGAGGGCTTCTGGCCATGGTGAGTCAGAGAAGTCTCAAGGAGGTAAAGTAGATGCATTTGGAGCAGATGGTGAAAGGAAGAGAAAGCGATCGGAGGACAGCATGGACAATAACTCGAAGGTTTCTAAGTCCTTTACATCTTTAACTCCTATTAGCACTTCTAGTATTGGTTCCATGAAATTTGATGAGTCAGAAGTCAACAGTACGGGCGAACAAAAGAATGAGAAACCTTCTATGGAGTATCCTACTGGGGATAGTGAGACCAATGGATCATTGAAAAGCAACCAACAATTCAACCCTGCACTAGTTGCTGCTGATACATCTATTTCTAAAGAAGCAGAAAAGCTATCTATTGAGAAGATCATCTCTGGTCCTTACGTTGCGCATCCAGCTTTTTTAGAAGAACCTGATGAACTTGAAGATGATGTCGGGTTAAGAAATCAAGTTAAGGATTATAGTGGGAACATGAAGATCAGCAACTTTGACTCTTCAAACGTAAATTCTGCAGTGGCAGAAGAGCCAGTAATTTCTAAGGAAACCATTTCTACTGAAACCACCTGCACGAATCATTTCAGCTCTAATGGGGTCCTGGAGGAGCTTGAGCCTGCTGAACTGACAGCACCATTTTTAAGTGCGACTCCTGCACCTGTACCACAAAAGAAGCCTCTTATCAGGTTGAACTTTACCTCCTTAGGAAAAGCTGCTGACAAGAGTTCTTAA 2247 0.4277 MGSPGLSNRNNGHQRLGITEPISLAGPTEDDVIKTRELEKYLQDVGLYESQQEAVVREEVLGRLDQIVKIWVKAISRARGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELQKMLSEMPEVTELRPVPDAHVPVMNFKFNGVSVDLLYARLSLWVIPEDLDISQESILQNADEQTVLSLNGCRVTDQVLRLVPNIQSFRTALRCMRFWAKRRGVYSNVSGFLGGINLALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPIWDPRRNPRDRYHLMPIITPAYPCMNSTYNVTSSTLRIMSEEFQRGSEICEAMEASKADWDTLFEPYPFFEAYKNYLQMDITAENVDDLRKWKGWVESRLRQLTLKIERHTYGMLQCHPYPGAFSDKSRPFHHCYFMGLQRKQGVPVNEGEQFDIRLTVDEFKHSVNAYTLWKPGMTIYVSHVKRRNIPNFVFPDGIRPSHTSKVTWDSKRSSEMRASGHGESEKSQGGKVDAFGADGERKRKRSEDSMDNNSKVSKSFTSLTPISTSSIGSMKFDESEVNSTGEQKNEKPSMEYPTGDSETNGSLKSNQQFNPALVAADTSISKEAEKLSIEKIISGPYVAHPAFLEEPDELEDDVGLRNQVKDYSGNMKISNFDSSNVNSAVAEEPVISKETISTETTCTNHFSSNGVLEELEPAELTAPFLSATPAPVPQKKPLIRLNFTSLGKAADKSS* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3481 748 Pfam Poly(A) polymerase predicted RNA binding domain 364 423 IPR007010 GO:0003723|GO:0043631
Aev05g3481 748 Pfam Poly(A) polymerase central domain 17 361 IPR007012 GO:0004652|GO:0043631
Aev05g3481 748 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 362 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Aev05g3481 748 MobiDBLite consensus disorder prediction 547 603 - -
Aev05g3481 748 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 668 - -
Aev05g3481 748 Gene3D Poly(A) polymerase predicted RNA binding domain 363 478 - -
Aev05g3481 748 Gene3D Beta Polymerase, domain 2 49 205 IPR043519 -
Aev05g3481 748 Gene3D - 17 359 - -
Aev05g3481 748 CDD NT_PAP_TUTase 56 211 - -
Aev05g3481 748 MobiDBLite consensus disorder prediction 499 522 - -
Aev05g3481 748 PANTHER POLY A POLYMERASE 1 668 - -
Aev05g3481 748 SUPERFAMILY Nucleotidyltransferase 17 210 IPR043519 -
Aev05g3481 748 SUPERFAMILY PAP/OAS1 substrate-binding domain 212 361 - -
Aev05g3481 748 MobiDBLite consensus disorder prediction 1 21 - -
Aev05g3481 748 MobiDBLite consensus disorder prediction 529 546 - -
Aev05g3481 748 MobiDBLite consensus disorder prediction 1 17 - -
Aev05g3481 748 Pfam Nucleotidyltransferase domain 82 166 IPR002934 GO:0016779
Aev05g3481 748 MobiDBLite consensus disorder prediction 497 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3481 Aev-Chr5 34097168 34102215 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3481 K14376 - gmx:100816915 1236.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3481 05 34097168 34102215 Aev05g3481 05 34097168 34102215 ECH