Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3438 ATGAGGTCTTCTTCTTCGGACACGATCAACATCGCTGCCAGTACTCAGAGACTCGATGTCGATAATCGAATCGCCCTTAGATTCTATTATCGGATCGCTGATAACATTATCAGACAGGCTGATATTTTTCGGGCTGAGAAGAATATTATTGACTTATATGTCATGCTCCTAAGATTTTCTAGTTTGGTGACTGAGACAATACCACGTCACCGGGATTATAGATCATTTCAACAAAGCAAAAAAGAACTATTGAAAAAGAAATTGTTAATTTCCTTGAATGAACTGGAGAAATTGAAACCTCTGGTGCAACAGAAGATCAATGAGCTTAACAGCAGACATTACCAGCAGAATGTTCAGGGAAACTTTCATTCAAATAATTCAATGAATTTGTCTCCATTGAAAAAGCAAACTTTGGGTAGTTATTATGGCCAAATAAAGACAGTCAGACCAACTGCTGGGGAGTTTGCTTATCAAGGATCAAGAGGCCAACAATTCTCTTATGTCAGGCCTGGGGAACAGCATTTGCAAAGACTATCTCTAACTCTTCCACCCCCAAAGGAGGAAACACTCTCTAAACATTCTATCCTTGGTCCTAATGGACTAAATGGGCAGTGGCGGCCACCTACAAGTGATAAAGAGGTCAGGTATCCAACCATCACAGATCTATCTCCAGTTGAAATACCAAGCCTACAACATTCTCTGAAATATGGATCACTTAATAAAAATGATAATAGCATCAAAGAACACAACAAATCAGATTCAGATTCAGTTCTTATCCAGAATGAGGATTGCAAGGCCCAGCAAGCTGAGGAACCTCCTTCTCTCATCTCTTTTGAAGCACTGGAAACCCCTGCTCAAATAGAAGTTATCAGACAGCCTTCTCCTCCACCTGTACTTGCTGAAGTACAAGATTTGGTACCTGCAGTGTCACCTCATCTTAACGAGGATGGACGTGAGACTGCGATTCCGTCATCAGATAGTTGTCTTCATGCCGAGTCGCCTCTGCAACTGCACATTTCGACTGCCTTGATGGAAAATTTTATGAAGCTTGCCAAGTCGAATACGGACAAAAATTTAGAGACTTGTGGCGTCCTTGCTGGTTTGCTTAAAAACAGAAAATTTTACATTACTGCTCTTATTATCCCAAAGCAGGAGTCAACCTCAGATTCTTGTCAGACTACAAATGAAGAGGAAATATTTGAAGTGCAGGATAAACGATCTCTTTTCCCCCTTGGATGGATACATACACATCCTACACAATCCTGTTTCATGTCATCAATTGATCTACACACTCACTACTCGTATCAGATTATGCTGCCAGAATCTGTTGCAATAGTCATGGCACCAAAAGATAGTTCAAGAAAGCATGGCATTTTTAGGTTGACAGCACCTGGTGGAATGTCTGTGATTAAAAACTGCCAGCAACGTGGGTTTCATCCACATAGCCAGCCCCCAGATGGTGGTCCTATTTACAAGACTTGTACAGATGTTTACATGAACCCTGATTTAAAATTTGAGGTCATTGATCTTAGGTGA 1536 0.4089 MRSSSSDTINIAASTQRLDVDNRIALRFYYRIADNIIRQADIFRAEKNIIDLYVMLLRFSSLVTETIPRHRDYRSFQQSKKELLKKKLLISLNELEKLKPLVQQKINELNSRHYQQNVQGNFHSNNSMNLSPLKKQTLGSYYGQIKTVRPTAGEFAYQGSRGQQFSYVRPGEQHLQRLSLTLPPPKEETLSKHSILGPNGLNGQWRPPTSDKEVRYPTITDLSPVEIPSLQHSLKYGSLNKNDNSIKEHNKSDSDSVLIQNEDCKAQQAEEPPSLISFEALETPAQIEVIRQPSPPPVLAEVQDLVPAVSPHLNEDGRETAIPSSDSCLHAESPLQLHISTALMENFMKLAKSNTDKNLETCGVLAGLLKNRKFYITALIIPKQESTSDSCQTTNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPESVAIVMAPKDSSRKHGIFRLTAPGGMSVIKNCQQRGFHPHSQPPDGGPIYKTCTDVYMNPDLKFEVIDLR* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3438 511 SUPERFAMILY JAB1/MPN domain 336 467 - -
Aev05g3438 511 CDD MPN_AMSH_like 336 511 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Aev05g3438 511 Gene3D - 3 127 - -
Aev05g3438 511 Coils Coil 92 112 - -
Aev05g3438 511 SMART pad1_6 336 464 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aev05g3438 511 MobiDBLite consensus disorder prediction 184 211 - -
Aev05g3438 511 Pfam USP8 dimerisation domain 11 100 IPR015063 -
Aev05g3438 511 PANTHER AMSH-LIKE UBIQUITIN THIOESTERASE 1 511 - -
Aev05g3438 511 PANTHER AMSH-LIKE PROTEASE 1 511 - -
Aev05g3438 511 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 334 440 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aev05g3438 511 ProSiteProfiles MPN domain profile. 337 467 IPR037518 -
Aev05g3438 511 SUPERFAMILY USP8 N-terminal domain-like 24 121 - -
Aev05g3438 511 Gene3D Cytidine Deaminase, domain 2 321 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3438 Aev-Chr5 33806551 33811442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3438 K11866 - gmx:100804754 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3438 05 33806551 33811442 Aev05g3438 05 33806551 33811442 ECH