Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3402 ATGGAAGCTGCATTGTGCAGTCCACTTGCTCTTTCACCAAACCATGTTTTCAATAAATCCAATCCTGGAGGGGATAAAAATTTTGTGTTCAGATGTAGCAAAGATCGGAGTATTGTAATGAGTGTGGCAGCCTCAGCAATAGGGAAAGGTGGTGGGTTGTTGGATAGGCCAACCATAGAGAAAACAAAACCTGGTCGGGAATCTGAATTTGACTTAAGGAAATCGCGAAAAACATCCCCGCCATACCGAGTGTTGCTGCACAACGACAACTACAACAAGCGCGAATATGTCGTGCAAGTGCTGATGAAGGTGATCCCCGGAATGACGATCGACAACGCGGTCAACATCATGCAAGAGGCTCATTACAATGGACTAGCAGTGGTGATCATATGTGCTCAAGTGGATGCAGAAGACCACTGCATGCAGTTGAGAGGAAATGGACTTCTGAGTTCAATTGAACCAGCTGATGGTGGGTGTTGA 480 0.4604 MEAALCSPLALSPNHVFNKSNPGGDKNFVFRCSKDRSIVMSVAASAIGKGGGLLDRPTIEKTKPGRESEFDLRKSRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTIDNAVNIMQEAHYNGLAVVIICAQVDAEDHCMQLRGNGLLSSIEPADGGC* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3402 159 Pfam ATP-dependent Clp protease adaptor protein ClpS 77 145 IPR003769 GO:0030163
Aev05g3402 159 Gene3D - 76 154 IPR014719 -
Aev05g3402 159 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS 1 159 - -
Aev05g3402 159 MobiDBLite consensus disorder prediction 55 74 - -
Aev05g3402 159 SUPERFAMILY ClpS-like 76 153 IPR014719 -
Aev05g3402 159 MobiDBLite consensus disorder prediction 59 74 - -
Aev05g3402 159 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 159 IPR022935 GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3402 Aev-Chr5 33558899 33560565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3402 K06891 - gmx:100785379 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3402 05 33558899 33560565 Aev05g3402 05 33558899 33560565 ECH