Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3019 ATGGCTTCCATTCCCACTCTATCTTCTCTTCTTCCTTCAATATCTCCTTCTCATTCTTCAAACCCCAACAACAACAACAACCACCAAGTACCCTTCACCTTCACTTTCCCTCTTACCTCTCTCTTCGGAACCAGGATTACCCTTCAACGCTCCTCTCCAATTCATTCTCTCCACAGCAACACCAATTCCCGCACCCATGCCACCTCTGCAACGGTGTCGTTTAGCCTCCCAACCACCGCGAAACCCGATATGGGCACACTCGAAAAATCCCCAAAATGGTCAGCGAGGTCTATAAAGTCTTTTGCAATGGCGGAATTGGAAGCTAGGAAGCTCAAGTATCCAAACACTGGAACTGAAGCACTTCTCATGGGGATTTTGGTCGAAGGAACAAGTAAAGCTGCAAAATTCTTAAGAGCTAATGGAATCACACTTTTCAAAGTACGCGAAGAAATAGTAGAGCTGCTTGGGAAATCCGACATGTATTTCTTTAGCCCTGAGCATCCCCCATTGACTGAACCAGCTCAGAAAGCCCTTGATTGGGCAGTTGATGAAAAACTGAAATCAGGTGAAGAAGGGGAAATAACTGTGACCCATTTACTTCTTGGAATTTGGGCACAAGAAGGATCAGCAGGTCGCCAAACCTTGTCTACTTTAGGTTTCAATGAAGAAAAAGCTAAAGAACTTGCTAAAGAAATTAATGGAGATGTTGATTTGAGCTTTAAGCAAGCTTAA 732 0.4413 MASIPTLSSLLPSISPSHSSNPNNNNNHQVPFTFTFPLTSLFGTRITLQRSSPIHSLHSNTNSRTHATSATVSFSLPTTAKPDMGTLEKSPKWSARSIKSFAMAELEARKLKYPNTGTEALLMGILVEGTSKAAKFLRANGITLFKVREEIVELLGKSDMYFFSPEHPPLTEPAQKALDWAVDEKLKSGEEGEITVTHLLLGIWAQEGSAGRQTLSTLGFNEEKAKELAKEINGDVDLSFKQA* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3019 243 MobiDBLite consensus disorder prediction 55 89 - -
Aev05g3019 243 MobiDBLite consensus disorder prediction 55 80 - -
Aev05g3019 243 ProSiteProfiles Clp repeat (R) domain profile. 87 235 IPR004176 -
Aev05g3019 243 MobiDBLite consensus disorder prediction 1 26 - -
Aev05g3019 243 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 13 241 IPR044217 -
Aev05g3019 243 Gene3D - 92 238 IPR036628 -
Aev05g3019 243 Pfam Clp amino terminal domain, pathogenicity island component 104 156 IPR004176 -
Aev05g3019 243 Pfam Clp amino terminal domain, pathogenicity island component 193 230 IPR004176 -
Aev05g3019 243 SUPERFAMILY Double Clp-N motif 92 235 IPR036628 -
Aev05g3019 243 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 13 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3019 Aev-Chr5 30793560 30795836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3019 - - gmx:100786582 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3019 05 30793560 30795836 Aev05g3019 05 30793560 30795836 ECH