Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3016 ATGAGCTTCGCAGCGTTCAAGATGATGCACTGCCCCACTGGCATCGACAACTGCGCCTCCGGCTTCCTCACACACTCACGCGCCGATTTCACCCCCAGAATCCCTACCCTACCCTCCGACGACCTCGACGCCGAATGGCCCCCCACGCGCCGCCCCGACATTGGTCCCCTCCCTAACCTCATCCTCACCTCCGCCAATGTACTCGAAATCTACGTCGTTAGGATCCAGGAGGAGGGCTCCAAGGGCGCCACCGCAGAGACCCGCCATGGCGGTGTCGTTGACGGCGTTGCCGGGGCCTCCCTTGAGCTCGTTTGCCATTACAGGTTGCATGGTAATGTTGAAACCATGGCTGTATTGAGCATTGGAGGTGGTGATGGTTCTAGAAGGAGGGATTCAATCATCTTAACTTTTAAAGATGCAAAGATTTCTGTTCTGGAGTATGATGATTCTATTCATGGACTTCGCACAAGTTCTTTGCATTGTTTTGAGGGTCCAGAATGGCTTCATCTGAAAAGAGGAAGGGAACAATTTGCAAGAGGTCCAGTGGTAAAGGTTGATCCTCAAGGCAGGTGTGGTGGGGTTCTTGCATATGATCTGCAAATGATAATACTAAAGGCTACTCAGGCTGGTTCTGTTTTAGTTGGTGAAGATGATGCCTTGGGTTCTGGTGGTGCAGTTGCTGCTCGTATTGAGTCATCTTATATGATAAATCTACGTGACTTGGATATGAGGCATGTAAAAGACTTTACATTTGTTCATGGGTATATTGAACCTGTGATGGTGATCCTGCACGAACGTGAGCTTACTTGGGCTGGGCGTGTCTCATGGAAGCACCATACTTGCATGATATCAGCCCTTAGTATAAGCACAACTTTAAAGCAGCATCCACTCATTTGGTCATCTGTTAATCTTCCCCACGATGCCTACAAGCTTCTTGCAGTTCCCTCACCCATAGGTGGTGTTCTTGTAATTGGTGCTAACACAATTCATTATCACAGTCAGTCTGCTTCATGTGCATTGGCCTTGAACAGCTATGCTGTATCGTTTGATAGCAGTCAGGAAATGCCAAGATCAAGTTTTAATGTGGAGCTTGATGCTGCCAATGCAACTTGGTTGTTGAGTGATGTGGCCTTGCTGTCAACAAAAACTGGTGAACTGCTATTGCTTACTCTGGTTTATGATGGAAGGGTTGTACAGAGACTTGATCTTTCCAAATCCAAAGCTTCAGTTTTGTCATCTGGTATTACGACAATTGGAAATTCTATGTTTTTCCTTGCAAGTCGATTGGGAGACAGTATGCTGGTGCAATTTTCTTCTGGATCTGGTGTTTCAATGTTGTCATCCAATCTGAAAGAGGAGGTTGGTGATATTGAAGTAGATGCTCCTTCATCAAAGAGATTGCGGAGGTCACCTTCTGATGCTTTGCAAGATATGGTTAGTGGTGAGGAGCTTTCATTGTATGGATCTGCACCAAATAGAACAGATTCAGCACAGAAAACATTCTCATTTGCAGTGAGGGATTCATTGATTAATGTGGGTCCTTTGAAAGATTTTTCGTATGGATTAAGGATAAATGCTGATGCAAATGCTACAGGGATAGCCAAACAGAGTAACTATGAATTGGTGTGTTGTTCTGGTCATGGTAAGAATGGCTCTCTCTGTGTTCTTCGGCAATCAATTCGACCAGAAGTGATAACTGAGGTTGAACTTCCTGGTTGCAAAGGAATTTGGACTGTTTACCATAAGGGCACACGCTCTCACAGTGCTGATTCTTCTAAGCTGGCTGATGATGAAGATGAGTATCATGCATACCTGATAATAAGTTTGGAGGCTCGTACTATGGTACTAGAAACCGGTGAGCTTCTGAGTGAGGTTACTGAGAGTGTTGACTATTATGTCCAAGGAAAAACACTTGCTGCAGGGAATTTATTTGGAAGGCGTCGAGTTATCCAAGTCTATGAACGTGGTGCTCGAATTCTAGATGGGTCTTTCATGACCCAAGATGTAAGCTTTGGAGCTTCTAATTCTGAATCTAATTCTGGATCTGAGAATGCCATTGCACTTTCTGTTTCTATAGCTGATCCATATGTCTTGATCAGAATGAGTGATGGAAGTATTCGACTTTTGATTGGAGATTCTAGTACTTGCACCATTTCTGTCACTTCTCCGGCTTCACTTGAAAGCTCAAAAGGATCAGTATCTTCATGCACACTGTACCATGATAAAGGGCCTGAGCCATGGCTAAGGAAGACAAGTACTGATGCATGGCTTTCTACTGGTGTTGGTGAGGCTATTGATGGCACTGATGGTGCAGCTCAGGACCATGGCGATATATATTGTGTTGTTTGTTATGAAAACGGTAGTCTTGAAATATTTGATGTACCCAATTTTAGTTGTGTTTTCTCTGTTGAAAATTTTATGTCTGGAAAGAGCCATCTTATTGATGCTCTGATGAAAGAAGCATCAAAAGATTCTCAAAAAGTGGATAGAGGTTCTGAGGGAGTGGTCAGCCAAGGCAGGAAGGAAAATATACCAAATATGAAGGTTGTAGAGTTGGCCATGCACAGATGGTCTGGACAGCACAGTCGTCCATTTCTTTTTGGGATTTTGAGTGATGGAACAATTCTTTGTTACCATGCTTATCTTTATGAAATTCCAGATGGTACTTCTAAGGTTGAGGATTCAGTATCTTCAGGAGGAACTAGTGTTTCCAGGCTTAGAAATTTGAGATTTGTTCGTGTCCCCTTGGATGCATATGCCAGGGAGGAGACGTCAAATGGATCCCCTTGTCAACAAATTACTATTTTCAAGAATATTGGTGGTTATCAAGGATTCTTCCTATCAGGGTCAAGACCAGCATGGGTTATGATGTTGAGAGAACGGCTTCGTGTTCATCCACAGCTCTGCGATGGGTCTGTTGTTGCTTTTACCGTCCTTCACAATCTAAATTGCAATCATGGGCTCATATATGTTACATCACAGGGTGTTTTGAAGATATGCCAGTTGCCTTCTGGCTCAAACTACGACAGCTACTGGCCTGTACAGAAAATTCCTCTAAAAGCCACTCCACATCAAGTAACATACTTTGCGGAGAAGAATCTGTATCCACTTATTGTCTCAGTTCCGGTTCTTAAGCCACTGAGTCAAGTTGTTTCTCTGGTTGAACAAGATGCCAACCATCAGGGCGAGAGTCAGAATTTAAATCCTGATGATCAAAACCGCTTTTATTCTATTGATGAGTTTGAGGTTCGTATTATGGAGCCAGATAAATCTGGTGGCCCTTGGCAAACAAAGGCAACAATTCCTATGCAAACTTCTGAAAATGCCCTTACTGTGAGAATGGTTACTCTGCTGAATACAGCCACAAAAGAAAATGAAACGCTTTTAGCCATTGGCACTGCTTACGTGCAAGGAGAGGATGTTGCTGCAAGAGGACGTATCCTCTTGTTCTCTTTGGGGAAAAATGCTGATAATCCTCAAACTCTGGTTTCAGAGGTGTACTCAAAGGAATTAAAAGGTGCTATATCTGCATTGGCCTCACTTCAGGGCCATCTATTGATAGCTTCTGGTCCCAAAATTATTTTGCACAAGTGGAATGGCACCGAGTTGAATGGTATTGCATTTTTTGATGCGCCACCATTACATGTAGTGAGCTTAAATATTGTAAAAAATTTCATCCTTATTGGGGATATCCATAAAAGCATATACTTTCTTAGTTGGAAAGAGCAGGGTGCTCAACTTAGCTTATTAGCCAAGGATTTTGGTTCTCTTGATTGTTTTGCAACAGAGTTTTTGATTGATGGAAGTACTCTGAGTCTCATGGTTTCAGATGATCAAAAGAACATCCAGATATTTTATTATGCTCCAAAGATGTCCGAGAGTTGGAAAGGACAGAAGCTTCTTTCAAGAGCTGAATTTCACGTTGGTGCCCATGTAACTAAGTTCTTGAGGTTGCAAATGCTATCCACTGCGGATCGGACTGGTTCTGGTCCAGTCTCAGATAAAACCAATCGTTTTGCCTTACTATTTGGTACATTGGATGGCAGTATTGGTTGTGTTGCACCTCTTGATGAAATTACATTTCGAAGACTTCAATCATTACAGAGAAAGCTTGTCGATGCTGTACCTCATGTTGCTGGCCTGAATCCAAGAGCTTTCAGACAGTTCTGTTCTAATGGAAAGGCGCATCGCCCTGGCCCTGACAGTATAGTTGATTGCGAGCTTCTATGCCATTATGAAATGCTTCCATTGGAGGAACAACTTGAAATTGCTCACCAGGTTGGAACAACTAGATCACAAATTCTCACAAATCTGAGTGATCTGTCTCTTGGAACAAGCTTCTTGTGA 4347 0.432 MSFAAFKMMHCPTGIDNCASGFLTHSRADFTPRIPTLPSDDLDAEWPPTRRPDIGPLPNLILTSANVLEIYVVRIQEEGSKGATAETRHGGVVDGVAGASLELVCHYRLHGNVETMAVLSIGGGDGSRRRDSIILTFKDAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPVVKVDPQGRCGGVLAYDLQMIILKATQAGSVLVGEDDALGSGGAVAARIESSYMINLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSSVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNSYAVSFDSSQEMPRSSFNVELDAANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNSMFFLASRLGDSMLVQFSSGSGVSMLSSNLKEEVGDIEVDAPSSKRLRRSPSDALQDMVSGEELSLYGSAPNRTDSAQKTFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKGTRSHSADSSKLADDEDEYHAYLIISLEARTMVLETGELLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGARILDGSFMTQDVSFGASNSESNSGSENAIALSVSIADPYVLIRMSDGSIRLLIGDSSTCTISVTSPASLESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGAAQDHGDIYCVVCYENGSLEIFDVPNFSCVFSVENFMSGKSHLIDALMKEASKDSQKVDRGSEGVVSQGRKENIPNMKVVELAMHRWSGQHSRPFLFGILSDGTILCYHAYLYEIPDGTSKVEDSVSSGGTSVSRLRNLRFVRVPLDAYAREETSNGSPCQQITIFKNIGGYQGFFLSGSRPAWVMMLRERLRVHPQLCDGSVVAFTVLHNLNCNHGLIYVTSQGVLKICQLPSGSNYDSYWPVQKIPLKATPHQVTYFAEKNLYPLIVSVPVLKPLSQVVSLVEQDANHQGESQNLNPDDQNRFYSIDEFEVRIMEPDKSGGPWQTKATIPMQTSENALTVRMVTLLNTATKENETLLAIGTAYVQGEDVAARGRILLFSLGKNADNPQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWNGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTADRTGSGPVSDKTNRFALLFGTLDGSIGCVAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRQFCSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILTNLSDLSLGTSFL* 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3016 1448 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 131 692 IPR018846 -
Aev05g3016 1448 Gene3D - 56 449 IPR015943 GO:0005515
Aev05g3016 1448 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 3 1439 - -
Aev05g3016 1448 Gene3D - 970 1355 IPR015943 GO:0005515
Aev05g3016 1448 Pfam CPSF A subunit region 1081 1413 IPR004871 GO:0003676|GO:0005634
Aev05g3016 1448 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1 3 1439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3016 Aev-Chr5 30765799 30782010 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3016 K14401 - gmx:100785543 2612.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3016 05 30765799 30782010 Aev05g3016 05 30765799 30782010 ECH