Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2975 ATGGGATCCTCATCAAAAACCATAGCGGATTCAGCATCATGGTACTGTGCCATAGTGTTACTGTCCCTAATTCTATTGGGGTCAATAAGGGAGAGCTATGACTATGATAGCTCCTCCGGCGGCGCCGCCGTGACGGGGCGGAGCAACCTGCATGGACGGCCGTGTGATGAGATATATGTGGTGGGAGAAGGGGAGACCCTACACACCATAAGTGACAAGTGCGGTGACCCTTTCATAGTTGAGCGCAACCCTCATATCCATGACCCTGATGATGTCTTCCCTGGCCTTGTCATCAAAATCACCCCTTCCAACCAATTCTAG 321 0.514 MGSSSKTIADSASWYCAIVLLSLILLGSIRESYDYDSSSGGAAVTGRSNLHGRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKITPSNQF* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2975 106 PANTHER LYSM DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 4 104 - -
Aev05g2975 106 Pfam LysM domain 59 101 IPR018392 -
Aev05g2975 106 PANTHER EMBRYO SAC 1 4 104 - -
Aev05g2975 106 CDD LysM 58 100 IPR018392 -
Aev05g2975 106 Gene3D LysM domain 51 105 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2975 Aev-Chr5 30436619 30436939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2975 - - var:108345202 162.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2975 05 30436619 30436939 Aev05g2975 05 30436619 30436939 ECH