Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2965 ATGTGTCAGCCAAAATCTCATGACCTCACAAGCAGCAATACAAGTATTTCTGACTTCCAAATTCCAAACAAGGACCCTGAGAACCCCATCACCAACATGCTGACCAAACCATTGATCCCTCAAAAAGCCACCCCAACACACAAAAAGACCCATCTCCCTGATGCATTCAAGGAAGTGATTTCCATCTCAAAAATAGCCTTTCCAATGATCCTCACTGGCCTACTCCTATATTGCAGATCAATGATCTCCATGCTCTTCCTTGGCCACCTTGGAGAGCTAGCCTTAGCAGGTGGCTCACTTGCTCTTGGTTTTGCAAACATCACAGGCTACTCAATCCTCTCTGGTCTTGCTGTTGGAATGGAACCCATCTGTGGACAAGCCTTTGGTGCCAAAAGGTTCACTCTTCTTGGCCTCTGCTTGCAGAGAACCATTCTTTTGCTTCTTTTCACTTCCATCCCTATTTCTCTGCTCTGGCTCTACATGAAGCAAATCCTTCTCTTGTGTGGCCAAGATGAAGCCATAGCCACACAAGCTCAATCATATCTTCTGTATTCCATCCCTGACCTCATAGCTCAGTCACTTCTTCACCCATTGAGGATTTACCTCAGAACCCAATCCATTACTCTGCCTCTAACCCTCTGTGCCACCTTCTCAATCCTTCTCCACATACCAATAAACTATTTCCTTGTTTCTCACCTCAGCTTGGGAATCAAAGGTGTGGCTCTTAGTGGGGTCTGGACAAATTTCAACCTTGTGGCTTCCTTGATTCTCTACATCATCATCTCAGGAACTCACAAGAAGACATGGAATGGATTCTCTTTTGAGTGCTTCACACAGTGGAAGTCACTCCTCAATCTGGCAGTTCCTAGCTGCATTTCTGTGTGCCTTGAATGGTGGTGGTATGAAATCATGATCTTGCTATGTGGTTTGTTGATAAATCCAAGAGCCACAGTGGCTTCTATGGGAATTTTGATCCAAACCACTTCTTTGCTCTACATTTTCCCATCATCCTTGAGCTTCAGTGTCTCAACAAGGGTAGGTAACAAGCTAGGAGCACAGAAGCCAAGAAAGGCAAAGCTTTCAGCCATTGTTGGACTCTCTTGCAGCCTCATATCAGGTGTCTCAGCACTGATTTTTGCTCTAATGGTTAGGAACATTTGGGCTAGCATGTTCACAAAGGACACAGAGATCATAGTATTGACATCTATGGTGTTACCTATTATTGGTCTTTGTGAGCTCGGAAACTGTCCTCAAACCACAGGTTGTGGTGTTCTTAGAGGAACTGCAAGGCCTAAAACAGGTGCTAACATAAACCTGTGGTGCTTCTACCTTGTGGGAATGCCTGTGTCAATTTGGTTAGCTTTCTTTGCTGGTTTTGATTTTCAAGGGCTTTGGCTTGGACTTCTTGCTGCTCAAGGGTCTTGTGCAGTGACCATGTTGGTGGTGATTTATAGAACAGATTGGGAATTTGAAGCTGAAAGAGCTGAGAAACTAACAGGAACAGGATCAGTATCAGTATCATCAGGAGGAGGAGTTTTTGATGATGATGATGATAAAAACCAAGAAGTTGAAGCAGAGAAGCCAGCAAAACATGATAGCAAGGAAGATTCTTTATCATCAGCTGATTCATATGAAGATGAACATTGCTGTGTTTAA 1656 0.439 MCQPKSHDLTSSNTSISDFQIPNKDPENPITNMLTKPLIPQKATPTHKKTHLPDAFKEVISISKIAFPMILTGLLLYCRSMISMLFLGHLGELALAGGSLALGFANITGYSILSGLAVGMEPICGQAFGAKRFTLLGLCLQRTILLLLFTSIPISLLWLYMKQILLLCGQDEAIATQAQSYLLYSIPDLIAQSLLHPLRIYLRTQSITLPLTLCATFSILLHIPINYFLVSHLSLGIKGVALSGVWTNFNLVASLILYIIISGTHKKTWNGFSFECFTQWKSLLNLAVPSCISVCLEWWWYEIMILLCGLLINPRATVASMGILIQTTSLLYIFPSSLSFSVSTRVGNKLGAQKPRKAKLSAIVGLSCSLISGVSALIFALMVRNIWASMFTKDTEIIVLTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKTGANINLWCFYLVGMPVSIWLAFFAGFDFQGLWLGLLAAQGSCAVTMLVVIYRTDWEFEAERAEKLTGTGSVSVSSGGGVFDDDDDKNQEVEAEKPAKHDSKEDSLSSADSYEDEHCCV* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2965 551 PANTHER PROTEIN DETOXIFICATION 44 512 - -
Aev05g2965 551 MobiDBLite consensus disorder prediction 501 551 - -
Aev05g2965 551 MobiDBLite consensus disorder prediction 1 26 - -
Aev05g2965 551 TIGRFAM matE: MATE efflux family protein 68 465 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev05g2965 551 PANTHER MULTIDRUG RESISTANCE PROTEIN 44 512 - -
Aev05g2965 551 CDD MATE_eukaryotic 58 494 IPR045069 GO:0042910|GO:1990961
Aev05g2965 551 MobiDBLite consensus disorder prediction 512 551 - -
Aev05g2965 551 Pfam MatE 68 228 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev05g2965 551 Pfam MatE 289 451 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2965 Aev-Chr5 30370014 30371669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2965 K03327 - gmx:100788027 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2965 05 30370014 30371669 Aev09g2261 09 25178534 25180195 ECH
Aev05g2965 05 30370014 30371669 Aev05g2965 05 30370014 30371669 ECH