Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2952 ATGTCTAGGAGAGATCTAGAGAATGGCGGGGCAAACAAGAACAGCCCCAACAACAACAACATCATCAATTACTCTACTACGCTTCCTATCAGCTCCACCTCCTATGCTTATGACCCTAATACCAATTGGACAGCATGGCTTGTTCCTATGTTTGTCGCCGCCAATTGCCTCGTTTTCATCATTCTCATGTACATCAACAATTGCCCTAAGTTCAATCCTGCCTCTCGGCCTCAATGCGTGGCCAGATTCCTTGGAAGATTCTCCTTCCAGCCTCTTGGCGACAATCCTCTCTTTGGCCCTTCCTCATCCACGTTGACAAAGATGGGAGCCCTTAAATGGGATAATGTTGTGAATCATCATCAAGGATGGAGGCTCATCACTTGCATTTGGTTACATGCTGGAATTGTTCATTTGGCAGCGAACATGTTGAGCCTGGTCTTCATTGGTATTCGACTTGAACAGCAATTCGGCTTTGTGAGGATAGGAATCATCTATCTGTTGTCCGGACTTGGTGGGAGTGTACTGTCATCTCTGTTTATCAGAAACAATATCTCTGTTGGTGCTTCTGGAGCACTTTTTGGACTTCTTGGAGCAATGCTTTCAGAACTTATCACAAACTGGACTATTTATACCAACAAGGCAGCTGCATTGCTCACGTTGTTGGTTATTATCGTCGTCAATCTCGCCATCGGCATTTTGCCTCATCTTGATAACTTTGCCCATATTGGGGGATTCCTGACAGGATTTCTCCTCGGTTTCATTTTACTTATCCGTCCTCAGTATGGCTGGTTAGAGCAACGACGTCTTCCTTCTGGCGTTCGCATCAAGTCAAAACACAAGACTTACCAATATGTTCTGTGGATTCTCTCCCTTGTTCTATTCATTGCTGGGTTATGTATTGCATTGGTGATGCTATTCAGGGGTGACAGTGGCTATGATCATTGCCATTGGTGTCGCTATCTTTCTTGTGTTCCAATTTCTAAATGGAAATGCAATGACAGTTAA 1005 0.4438 MSRRDLENGGANKNSPNNNNIINYSTTLPISSTSYAYDPNTNWTAWLVPMFVAANCLVFIILMYINNCPKFNPASRPQCVARFLGRFSFQPLGDNPLFGPSSSTLTKMGALKWDNVVNHHQGWRLITCIWLHAGIVHLAANMLSLVFIGIRLEQQFGFVRIGIIYLLSGLGGSVLSSLFIRNNISVGASGALFGLLGAMLSELITNWTIYTNKAAALLTLLVIIVVNLAIGILPHLDNFAHIGGFLTGFLLGFILLIRPQYGWLEQRRLPSGVRIKSKHKTYQYVLWILSLVLFIAGLCIALVMLFRGDSGYDHCHWCRYLSCVPISKWKCNDS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2952 334 SUPERFAMILY Rhomboid-like 42 260 IPR035952 -
Aev05g2952 334 Pfam Rhomboid family 118 258 IPR022764 GO:0004252|GO:0016021
Aev05g2952 334 PANTHER RHOMBOID-RELATED 1 333 IPR002610 GO:0004252|GO:0006508|GO:0016021
Aev05g2952 334 Gene3D - 40 258 IPR035952 -
Aev05g2952 334 PANTHER RHOMBOID-LIKE PROTEIN 3 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2952 Aev-Chr5 30254932 30256663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2952 - - gmx:100813345 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2952 05 30254932 30256663 Aev05g2952 05 30254932 30256663 ECH