Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2950 ATGCGAACCTTCATTTCACACATATCCAACTTGTACAAGCGCAAGATCGAAATTTTCCCTCTGGTTCCTCATCACCACAGCCCCAATTTCAATCCCACACGAGCAATGTCTCAATCCACATCGATCCCCAAGAAGATGCAGAGGATTCGCGACCACGCCTACGATGACTACATGGAAATCGAGAAGAAGACTCGCAAAGCCCTCAAGTTCCAGAACCTCATCCTCTCCGAACCCAACCAATCGCTCACAATCTCGCGCCTCGAAACTCTAGCTCGACGAATCGGCTTCAAGCGCCACGAGGTGGGTGCGTTCATCCTCAAGTTCCCTTACGTCTTCGAAGTCTTCGAGCACCCCGTGCAGCGCGTCCTCTTCTGCCGTCTCACGCGCCAGGCGATCCTCCAGATTCAGCAGGAGCGCCAAGCGTTGCTCGCGCAGATTCCAAGCGCCGTCATGCGCCTCCGCAAGCTCCTAATGATGTCGAACGCCAAGCGCCTTCGCTTGGAGCACGTGAGGATCGCACGCTCCGCCCTGGGGTTACCGGACGACTTCGAATTCTCGGTGGTTCTGAGGTACCCTGAATTTTTCAGATTAATTGATGCAAATGAGAGAAGGCATAAGTACATTGAGCTTGTAGAGCGAGACCCTAGTTTAGCAATTTGTGCAATTGAGAAAGTCAGGGAGAGAATTTATAGAGAGAAAGGTGTTGATGCTGAAGATGTTAGGTTTTCATTTGTGATTGATTTCCCGCCAGGTTTCAAGATTGGCAAGTATTTTAAGATTGCAATGTGGAAGTGGCAGAGGGTTCCTTATTGGTCCCCTTATGAGGATGTTTCTGGGTATGATTTGAGGTCAATTGAGGCGCAGAAGAGGATGGAGAAGAGGGCTGTTGCAACGATTCACGAGTTGTTGTCGTTGACCGTGGAGAAGAAGATTACGTTGGAGAGGATTGCGCATTTCCGGCAGGCGATGAACCTTCCAAACAAGTTGAAGGACTTCCTGCTTCAGCACCAGGGGATTTTCTATGTTTCGACAAGGGGGAACCAGGGGAAGCTTCACACGGTTTTCCTCCGGGAGTCATATAGGAAGGGCGAGCTGATCGAGCCGAATGATCTGTATTTGGCACGGAGGAAGCTGGCCGAGTTGGTCTTGTTGAGCCCCCGGAAGGCGAAGGTTGATAGGGAATTGGTTGGATATAGGAGAAGCAGGTTGGATGATGAAACGGGGAAGATAACAAGGGAATTTGTAGAGGATGTTTGTGAGGAATTTAAGGGTGGAGATCAAATGGGGCAGGAAGAGGATGATTTGTCATCGGATATAGGCTCAGATATTGAATCTGATGTTGGAGATGAAGATGAAGATTGTGATGATAGTGTATCATCGATGCAAAGGACAAATTAA 1398 0.4921 MRTFISHISNLYKRKIEIFPLVPHHHSPNFNPTRAMSQSTSIPKKMQRIRDHAYDDYMEIEKKTRKALKFQNLILSEPNQSLTISRLETLARRIGFKRHEVGAFILKFPYVFEVFEHPVQRVLFCRLTRQAILQIQQERQALLAQIPSAVMRLRKLLMMSNAKRLRLEHVRIARSALGLPDDFEFSVVLRYPEFFRLIDANERRHKYIELVERDPSLAICAIEKVRERIYREKGVDAEDVRFSFVIDFPPGFKIGKYFKIAMWKWQRVPYWSPYEDVSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRQAMNLPNKLKDFLLQHQGIFYVSTRGNQGKLHTVFLRESYRKGELIEPNDLYLARRKLAELVLLSPRKAKVDRELVGYRRSRLDDETGKITREFVEDVCEEFKGGDQMGQEEDDLSSDIGSDIESDVGDEDEDCDDSVSSMQRTN* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2950 465 PANTHER PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 26 443 IPR040295 -
Aev05g2950 465 MobiDBLite consensus disorder prediction 423 465 - -
Aev05g2950 465 Pfam Plant organelle RNA recognition domain 50 385 IPR021099 GO:0003723
Aev05g2950 465 MobiDBLite consensus disorder prediction 431 456 - -
Aev05g2950 465 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 26 443 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2950 Aev-Chr5 30241600 30242997 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2950 - - adu:107491171 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2950 05 30241600 30242997 Aev05g2950 05 30241600 30242997 ECH