Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2941 ATGGAGGATCCGTGCTCCGATGAGCTGCCACCAGGTTGGACTGTGGAAGTCAAAGTTAGAAAGAATGGTAAGAGAGACAAGTATTACTTTTCCCCTGCAAGTGGCCTAAAATTGAATTCCAAGGTAGAGGTTTTTCGGCATCTTGACAATGCTGCTCAGAACAAAGTCAGCATTCAGAGAGTTGCAGACAATGTTGTAGTTGAGAAAGGTGTTGCAGAAGGATTACCACCAGGCTGGATGAAAAGAACCAGAGTCACAACAAAGGGAGCTACAGTTAGAAGAGATTCGTACTACATTGATCCTGTAAGTGGTTATGCATTCCGCTCTATAAGAGACGTTGATCGATATCTTGAATCTGGGGAAATAGGAAGGAACGCATTCAAACCAAAAGACAGCAGTGATATGAAGTTAAAAGCTGACGAATCCTCTTCTGTAGGTGTAACCACAACACCAACATTATCTGCTAGCATGGGTCCGAGCTCAGATTTGGACATGATAGCCAATGACAAACTGGTTCAGAAACCTACATGGTCTGGAGCACATGTTTCTACAGCCATCTCGGAAGGTGTGGTGGGCACTGGATTGACCCCAGTTCAATTGCAAGCTGAAGGTTCAGGTCAGAAAGAAGGGAAGGTTGGTCTAACTGAAACCACCTCGGTCCCAGGTTTCACAGATGACGAATCGCAGGAGAAGAAACTTCAAGAAAATGAACAGCCAAAACATGTAGCTGAAAAATCCCAAGTTCGACAGCGCAAAAGACGTAAAAGGGAGTTCAATTTGCCTCGCCGTTCTTCAAAGCGTCTTGCTGGAATTCAGATTGATCCAGTTCCAGAACTTATAACAAGAAGTCGCAGAGGCCGAGCTGCTGTTAATCAATCAGCCGAGGGAAAAACAGTCAGAAATGAGGATAAAGACTCCAACAGCTTCCTGAATGCTGAAGCAAAACAGACTAATGCACTTGAGGGCGGGTCAGAGACCAAGTGCAAATCTGAAAGTACCACAACCACAGTGGAGTCTCCTAAATCATATCAGAGTAGGCATTTGTATGGTGAGTTCTCTACTCCAGAATGTGTTCCTGAGAAGACTAAGGAAGAGCATGGAAGTGACAAGGATCAAGAATGCTTTTCATTTTGGCCTCAGCAGAGCCATTCTACTATGAAAGATAATACACAAGTCGCTGAAAATGGAGACACGGTTGATGCTATATTGGATCGCTACTCCCATGAGTTTCCTGTTAGAGAACTACTAAAAGACCCATGTATTGCATTTGCAGTGCAAGTTCTCACTGGTGTAACATTCGACACCTCGAAAATCTCACAGGATTCTGCTGAACCGCGAATTAGTGAACATTCTGAGACATTGGCTGCTGCTGAAGGGCATGGCAATGGCAAGCAAATCAAAGGGCCAAATATGGAAAATGATAAGGGAAAATGCAATGTGTTTTCACATCAAGAAAACTATGCTATTCGACAAGAACATGCTGGTGATGCTGGAATTGCCAATAAGGCCAATGAGAACACAGGATCATCTTCTGAAAAGGCACTTGATATTCTACACATGGATCCATGCATTGAATTTGCAATAAAGACTCTCACTGGCTCAATCTCATTAGACTCTCAACAAAATCCTAAGAACTGCATTCAACAGCAACTGAGCTCACCAAATTCCCATCATGGTGACATTGCCTTGCCAAGTGTCAGTTTAGATAGCGTACGCCAGACTGACTATTACCGCAGCCAAAACTTCGGTACACAGAAACCAATGTTCAATCAGACTTTTGTGGATCCAACACTTCAACACACTAGAAATGTTGGCATAGGAAGTTCTGCTGGAGCTAGAATCCCCCATTGTGGTGAAGATAGAAGGAATGTTTGA 1875 0.4363 MEDPCSDELPPGWTVEVKVRKNGKRDKYYFSPASGLKLNSKVEVFRHLDNAAQNKVSIQRVADNVVVEKGVAEGLPPGWMKRTRVTTKGATVRRDSYYIDPVSGYAFRSIRDVDRYLESGEIGRNAFKPKDSSDMKLKADESSSVGVTTTPTLSASMGPSSDLDMIANDKLVQKPTWSGAHVSTAISEGVVGTGLTPVQLQAEGSGQKEGKVGLTETTSVPGFTDDESQEKKLQENEQPKHVAEKSQVRQRKRRKREFNLPRRSSKRLAGIQIDPVPELITRSRRGRAAVNQSAEGKTVRNEDKDSNSFLNAEAKQTNALEGGSETKCKSESTTTTVESPKSYQSRHLYGEFSTPECVPEKTKEEHGSDKDQECFSFWPQQSHSTMKDNTQVAENGDTVDAILDRYSHEFPVRELLKDPCIAFAVQVLTGVTFDTSKISQDSAEPRISEHSETLAAAEGHGNGKQIKGPNMENDKGKCNVFSHQENYAIRQEHAGDAGIANKANENTGSSSEKALDILHMDPCIEFAIKTLTGSISLDSQQNPKNCIQQQLSSPNSHHGDIALPSVSLDSVRQTDYYRSQNFGTQKPMFNQTFVDPTLQHTRNVGIGSSAGARIPHCGEDRRNV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2941 624 SUPERFAMILY DNA-binding domain 6 53 IPR016177 GO:0003677
Aev05g2941 624 MobiDBLite consensus disorder prediction 128 161 - -
Aev05g2941 624 SMART TAM_2 2 66 IPR001739 GO:0003677
Aev05g2941 624 SMART TAM_2 68 139 IPR001739 GO:0003677
Aev05g2941 624 MobiDBLite consensus disorder prediction 310 344 - -
Aev05g2941 624 MobiDBLite consensus disorder prediction 202 270 - -
Aev05g2941 624 Gene3D - 5 56 - -
Aev05g2941 624 PANTHER OS04G0193200 PROTEIN 5 616 IPR038945 -
Aev05g2941 624 MobiDBLite consensus disorder prediction 225 245 - -
Aev05g2941 624 Gene3D - 57 153 - -
Aev05g2941 624 Pfam Methyl-CpG binding domain 75 121 IPR001739 GO:0003677
Aev05g2941 624 Pfam Methyl-CpG binding domain 7 53 IPR001739 GO:0003677
Aev05g2941 624 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13 5 616 - -
Aev05g2941 624 MobiDBLite consensus disorder prediction 604 624 - -
Aev05g2941 624 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 63 IPR001739 GO:0003677
Aev05g2941 624 MobiDBLite consensus disorder prediction 142 161 - -
Aev05g2941 624 MobiDBLite consensus disorder prediction 246 261 - -
Aev05g2941 624 MobiDBLite consensus disorder prediction 284 344 - -
Aev05g2941 624 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 65 142 IPR001739 GO:0003677
Aev05g2941 624 SUPERFAMILY DNA-binding domain 73 122 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2941 Aev-Chr5 30167051 30171925 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2941 - - lang:109363276 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2941 05 30167051 30171925 Aev05g2941 05 30167051 30171925 ECH