Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2927 ATGGATTCAAGACCAGTCCAAACTCATGCCCACGAGTCCGATCAACATCACAATCAACCCCATAACCTTGGCTTACAACAAGAGGAGCACCAACATGACCATGAGAAGAAGTCGGTTCTGAAAAAGGTGAAGGCAAAGGCTAAGAAAATCAAGGACACAATAACTAAACATGGTCATCATGACAATGAACATGGTCATCACTATGAAGATCAACACATCCCTGATGATCATGATTTGGATGAGGAAGATGATGATGATGAGGAAGAAATGGTTGAAGACCCTGAAATCCATGGAGCACCAATTTATGATAGTGCTGCTGTTAAAAGTGGCACACATGCACAAAATTTAGGAGTTAAGTTTGGAGGCACATCAATTATGGGAGTAGAACCTCCTCATCACCAGCCAAAAGTTGTAGTTGTTTCTCCAACTACTGAAACTGATCAGAGCAGAGTCATTGATCCAGCAAGAACATTTGCTGGGGTTGGTGAAGGTATTGGAGCACATCATCATAATAAGGTTAACTTGGAGAGACCAATGGGTTTGGAGGAAGATCCTCATGCACCAGGAAGTAGACTTCATACACACACACATGCTCCTGCTAATTATGAAACCAAAGTCACTGATCCAACAGGAGCAGGTGGTGCAGAAATTGATATCACCCCAGTTCAGAATTCCTTTGCAAGAATGAATGTTCATAATAATGAGCCAAAACCTGACCTAAGCCCAAAAATTCTTCCACCTGTTGCTGAGACTCAGTACCTTCCGTCAGTTGGAGGCTTCCACCAATTTGAGCCAGAACTTTCCACTGCAACAAAAACTCAGTTCCCACAAGCAGAAACCTATGACCAACATTTGCCACAACTTTCTAGTGAAATCAAAACTAATTACCCTAGAAGCCATGACATGTCAGGCTTGTCTACTGCAACAAGAACAACTCAATACCCTTCTGCTATAACTCATGACCTTAACTCGCGACAGATATCTAGTCCAACTAATACTCAATACCCTCCTGCTATAAGCCATAATCAGAATTTGCCACAAATGTCTAGTGCAACTAATACACAATACCCTTCTCTTACAAGCCATGATAAGAACTTGCCACAAATGTCTAGTGCAACTAATACTCAATACCCTTCTGCTATAAGCCATAATCAGAACTTACCACAAATGTCTAGTGTAACTAATACACAATACCCTTCTGCTATTAGCCATGACCAAAACTTGTCACACATGTCTAGTGCAACAAGAACAGCACCATACCCTTCTGCTGGAAGCCATGATCAATTCATGCCAGAATTCTCTACTGATCCTGGATCACTCTACCCTCCAGCTAAGAACTTTGACCAGAACTTTCTAGAACAGTCAAAAACTCAGTACCCTTCTGTTGGAAGCCATGATCAATTTTCACCTGAGCCAACAATTCCCACAAGCACCAATAGATATGAGGAAAATTCACTACCAATAGGACAAACCTTCAACACCAACACGACCACAGTTGGAGCACAACCTCAACCACATTATGAATCCATGGAGAACCCATCAAATCAGAGCAGTTACACAGATAAAATCTCTTCTGCTACCTCTGCAATAGCTGATAAAGCTGTTGCTGCTAAGAACATGGTAGCTTCCAAGCTCGGATATGGCGAACAAGAAGGTGAAAAGAACCAGAATGAAGAAACCAGAGGCGGTGAAAAACCATCCAACCAGAGCAGTTACATCTCATCTGCAACATCAGCTATAGCTGATAAAGCTGCATCAGCAAAGAACACAGTAGCTTCCAAGCTTGGATATGGCGAAAAGGAAGATGAAACAGAAAAAAATGTAGCCTCAACAAAAGAAACACATGAGAATGCTTCTTCAACTACCATGTCAAGTTCACCAACAGAATATGGGAAGAAAATTGCTCAGTCTCTGACAGAGAAACTTGCTCCGGTTTATGGAAAAGTTGCTGGTGTAGGAAGTACTGTGAAATCCAAGGCTCCTGGAACTGAAACTGATAAAGGGGTTTCTGTGAAGGACTATTTTGCTGAGAAATTAAGGCCAGGGGATGAAGACAGAGCACTCTCTGAGGTGATATCTGAGACATTGTATAAGAGGAACAATGAAGAAGAGAAAACAAGTGTGGTTCATGGAGAAGCTGATAGGGATATGAAGAATGTGGTTTCTGATGCTATGCACAAGAGAGGAGAAGAAGAACATGTGAATAGGCCATTAATGGGGAAGGTGACTGAGTCAGAGGAAGTGAAGAGAAGATTGGGAAGTGATGAGGTAACAGAGAGAAAGTATGAAGAGAGGTATGTGAATAGTCCTGGGCAAGGTGTTGTTGATAAGCTTAAAGGTGTTGTTGGGTCTTGGTTTAGTAAACAAGAAGATGAAAATCTATCTTCATCACAAGGTCAAGGTGATGAACATTGTAGTTGTATACTTGAGCTGAACAAGTTAACCAAGGTGCAGGAGAAAGGAGACTCCAGGAATCATCTAATTGAAGGACTTGGTGGTCCTTGGCAATTATGTAACCAACCGTTTCATTGTGATGATGAGTATAGGAGTGGGTTTGAATTAGTTGAGGAGCCTCTGAAGAAAATGTGTGTAGCTTCGTGTGAAAGCGTGGACATTGATTCAAACGAGGAGGAGGTGGAGGATGGTAGATTCGAGGGGAAGCAATTTTTGCATAGGAATGTGTTCCTAGAAAAGGTGAGGATTGATGCTGAGAGGGTTCTGGAGGTTATTGGACAGGATGGTCCTGAGTTTGATTCTAGATTGGCTTTGAATGAGTTGCATGTAAGGCCATCGGCGATTCTCGTGAGGGAGGTTTTGCTTCGGATGCTGAAAGAGATAAACTGTGAAAACAAGGCGAGGTGTGCGAAATTGGCGTACAAGTTTTTCTTGTGGTGTGAACAACAGGAGGGTTACTGTCACACTGCCAATTCCTATCACTTGGTTATGCAGATATTCGCGGAGTGTGATGAGTTGAAGGCGATGTGGAGGCTTGTTGATGAGATGATTGAAAAAGGGTTTCCAGCTACTGCTCGTACTTTCCACATTCTGATTTGTAGCTGTGGTGAGGCTGGTTTTACTAGGAGGTTGGTCATGAAGTTCATTAAGTCGAAATCATTTAACTATCGGCCTTTTAGGCACTCGTACAATGCAATTCTCCATTGTCTTCTTGTTTTAAACCAATACAAGTTGATTGAGTGGGTACATAGAAAGATGTTGCTTGAGGGTTTTTCCTCAGATGTTTTAACTTATAATATTGTCATGTTAGCAAAGTATAGACTTGGTAAACTCTATCAGTTTAACAGGTTGCTTGATGAGATGGGTAGAAGTGGTCTTTCTCCGGATTTTCATACTTACAACATTCTTCTTCATGTTCTTGGTAAAGGAGATAAACCGCTTGGAGCTTTTAATCTTCTAAATAACATGAAAGAAACAGGTGTAGGGCCAACTGTTCTTCATTTCACCACATTGATAGATGGACTGAGCAGAGCCGGAAACATGGATGCTTGCAAATATTTTTTCAATGAAATGATAAAGAGTGGGTGTATGCCAGACGTGGTGGCATACACTGTAATGATCACAGGATATGTAGTGGCTGCTGAGCTTGAGAGTGCACAGGAAATGTTTCAAGAGATGATTTCTAGAGGACAAATCCCGAATGTATTTACTTACAATTCCATGATTCGTGGATTATGTATGGCTGGAAAGTTTGATGAAGCATGTTCAATGCTCAAGGAAATGGAGGCCAATGGTTGTAGTCCAAATTTTGTTGTCTATACTACCTTAGTGAGTAATCTGCGGAATGCTGGAAAGCTTGCCGAAGCTCATGAAGTGATAAGACAGATGAGGGAGAAGGGAAACAGCCAAATGGCCTTACCTGCCGGTTATTCTGCTGGTGTTGAAGCTGGAGAAAAAAATGTTGAACCATTAAGGAAAGCTAAGAGAGGAATGCGTTGTTGGTCACCGGGTTTATGA 3972 0.4177 MDSRPVQTHAHESDQHHNQPHNLGLQQEEHQHDHEKKSVLKKVKAKAKKIKDTITKHGHHDNEHGHHYEDQHIPDDHDLDEEDDDDEEEMVEDPEIHGAPIYDSAAVKSGTHAQNLGVKFGGTSIMGVEPPHHQPKVVVVSPTTETDQSRVIDPARTFAGVGEGIGAHHHNKVNLERPMGLEEDPHAPGSRLHTHTHAPANYETKVTDPTGAGGAEIDITPVQNSFARMNVHNNEPKPDLSPKILPPVAETQYLPSVGGFHQFEPELSTATKTQFPQAETYDQHLPQLSSEIKTNYPRSHDMSGLSTATRTTQYPSAITHDLNSRQISSPTNTQYPPAISHNQNLPQMSSATNTQYPSLTSHDKNLPQMSSATNTQYPSAISHNQNLPQMSSVTNTQYPSAISHDQNLSHMSSATRTAPYPSAGSHDQFMPEFSTDPGSLYPPAKNFDQNFLEQSKTQYPSVGSHDQFSPEPTIPTSTNRYEENSLPIGQTFNTNTTTVGAQPQPHYESMENPSNQSSYTDKISSATSAIADKAVAAKNMVASKLGYGEQEGEKNQNEETRGGEKPSNQSSYISSATSAIADKAASAKNTVASKLGYGEKEDETEKNVASTKETHENASSTTMSSSPTEYGKKIAQSLTEKLAPVYGKVAGVGSTVKSKAPGTETDKGVSVKDYFAEKLRPGDEDRALSEVISETLYKRNNEEEKTSVVHGEADRDMKNVVSDAMHKRGEEEHVNRPLMGKVTESEEVKRRLGSDEVTERKYEERYVNSPGQGVVDKLKGVVGSWFSKQEDENLSSSQGQGDEHCSCILELNKLTKVQEKGDSRNHLIEGLGGPWQLCNQPFHCDDEYRSGFELVEEPLKKMCVASCESVDIDSNEEEVEDGRFEGKQFLHRNVFLEKVRIDAERVLEVIGQDGPEFDSRLALNELHVRPSAILVREVLLRMLKEINCENKARCAKLAYKFFLWCEQQEGYCHTANSYHLVMQIFAECDELKAMWRLVDEMIEKGFPATARTFHILICSCGEAGFTRRLVMKFIKSKSFNYRPFRHSYNAILHCLLVLNQYKLIEWVHRKMLLEGFSSDVLTYNIVMLAKYRLGKLYQFNRLLDEMGRSGLSPDFHTYNILLHVLGKGDKPLGAFNLLNNMKETGVGPTVLHFTTLIDGLSRAGNMDACKYFFNEMIKSGCMPDVVAYTVMITGYVVAAELESAQEMFQEMISRGQIPNVFTYNSMIRGLCMAGKFDEACSMLKEMEANGCSPNFVVYTTLVSNLRNAGKLAEAHEVIRQMREKGNSQMALPAGYSAGVEAGEKNVEPLRKAKRGMRCWSPGL* 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2927 1323 MobiDBLite consensus disorder prediction 406 422 - -
Aev05g2927 1323 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1219 1253 IPR002885 -
Aev05g2927 1323 Pfam CAP160 repeat 573 598 IPR012418 -
Aev05g2927 1323 Pfam CAP160 repeat 523 548 IPR012418 -
Aev05g2927 1323 PANTHER OS10G0506000 PROTEIN 837 1287 - -
Aev05g2927 1323 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1114 1148 IPR002885 -
Aev05g2927 1323 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1184 1218 IPR002885 -
Aev05g2927 1323 MobiDBLite consensus disorder prediction 546 575 - -
Aev05g2927 1323 Gene3D Tetratricopeptide repeat domain 1213 1286 IPR011990 GO:0005515
Aev05g2927 1323 MobiDBLite consensus disorder prediction 1 18 - -
Aev05g2927 1323 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1079 1113 IPR002885 -
Aev05g2927 1323 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1149 1183 IPR002885 -
Aev05g2927 1323 Pfam PPR repeat 1153 1181 IPR002885 -
Aev05g2927 1323 Gene3D Tetratricopeptide repeat domain 1074 1212 IPR011990 GO:0005515
Aev05g2927 1323 MobiDBLite consensus disorder prediction 1 90 - -
Aev05g2927 1323 Pfam PPR repeat 1249 1282 IPR002885 -
Aev05g2927 1323 MobiDBLite consensus disorder prediction 26 40 - -
Aev05g2927 1323 MobiDBLite consensus disorder prediction 322 383 - -
Aev05g2927 1323 MobiDBLite consensus disorder prediction 596 612 - -
Aev05g2927 1323 MobiDBLite consensus disorder prediction 54 74 - -
Aev05g2927 1323 MobiDBLite consensus disorder prediction 459 523 - -
Aev05g2927 1323 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 974 1008 IPR002885 -
Aev05g2927 1323 Pfam PPR repeat family 1079 1125 IPR002885 -
Aev05g2927 1323 Pfam PPR repeat family 1183 1231 IPR002885 -
Aev05g2927 1323 MobiDBLite consensus disorder prediction 596 631 - -
Aev05g2927 1323 Gene3D Tetratricopeptide repeat domain 919 1058 IPR011990 GO:0005515
Aev05g2927 1323 MobiDBLite consensus disorder prediction 406 446 - -
Aev05g2927 1323 MobiDBLite consensus disorder prediction 75 90 - -
Aev05g2927 1323 MobiDBLite consensus disorder prediction 613 631 - -
Aev05g2927 1323 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1254 1288 IPR002885 -
Aev05g2927 1323 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 837 1287 - -
Aev05g2927 1323 TIGRFAM PPR: pentatricopeptide repeat domain 1221 1254 IPR002885 -
Aev05g2927 1323 TIGRFAM PPR: pentatricopeptide repeat domain 1153 1185 IPR002885 -
Aev05g2927 1323 TIGRFAM PPR: pentatricopeptide repeat domain 1186 1220 IPR002885 -
Aev05g2927 1323 TIGRFAM PPR: pentatricopeptide repeat domain 1116 1149 IPR002885 -
Aev05g2927 1323 TIGRFAM PPR: pentatricopeptide repeat domain 1256 1285 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2927 Aev-Chr5 30074313 30081353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2927 1067 1287 Glycosyltransferase AT1G05670 29.412 2.20e-26 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2927 - - aprc:113866664 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2927 05 30074313 30081353 Aev05g2927 05 30074313 30081353 ECH