Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2899 ATGTCCGAAGTTGCCATGACAGTCGTGAAACCTGAGATGAAATCCTACATCTGGCTTCAAACTGCGGATGGTTCTATTCAACAAGTAGAGGAAGAGGTTGCCATGTTTTGCCCCATGATTTGCCAGGAAGTACTTCAGACAGGCTTGGGATCTTCCAAAACTTATGCTATATCTCTTCCACAACGTGTCAATCCTGCAATCTTGGGTTTAATACTTGATTATTGTCGGTTCCACCAAGTACCGGGCCGCTCTAATAAGGAGCGCAAAACCTTTGATGAAAAGTTTATTAGGATGGACACAAAGAAGTTATGTGAGTTGACATCTGCTGCTGACAGCCTCCAGTTGAAGCCTTTGGTTGACCTGACCAGCCGAGCACTTGCTCGGATTATTGAAGGAAAAACACCAGAGGAGATTCGTGAAACATTTCATTTGCCTGATGATTTGACTGAGGAGGAGAAACTCGAGCCTCTTAGAAATATAACTGATGATCCACGTATTCGACTTCTAAACAGATTATATGCTAGAAAGAGGAAAGAACTAAAAGAGAGGAAGAAACTGAAGAATGTTGAGATTGAGGAGGAGCCTAAGGACGAGCGCTCAGTTGATGATCTTCTTTCATTTATTAATGGTGTAGATGGGGATATGAAAGGAACAAGAGTGAATAAGAATAAAAAGAAAAACAGGAGAAGGAAAGACCATGCAAAGGATCATTCTTTAGAAAATGCAATTGAAAACCAAGATGAGTTGAATCCTCTTCCTGCTGCATGTCACGATAGTAATTTTGACAATGGCTTAGAGGCCTCTCCAAGCAAACACTCGAGGATGCAAGATGCTCCTGCTGTTAATTTTTCTCCAAAGCTTGAGTTTATTGATGGTGATCTTGATGATGATATAGATCCTGCAATGAAGGAGGAGCTTGACAGAGAAGTGGAAGATTTTGCACGAAGATTAAATTCAGATTGGCCTGAAAGGATGCAGATTTTATCTTTGGGCCAAGACAGAAGGCTTCTACCAATTTCTATGAATAGCAATTGTTCCACACGCATCTATACTGGTTTTGATCGGAGATAG 1071 0.4118 MSEVAMTVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICQEVLQTGLGSSKTYAISLPQRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKERKKLKNVEIEEEPKDERSVDDLLSFINGVDGDMKGTRVNKNKKKNRRRKDHAKDHSLENAIENQDELNPLPAACHDSNFDNGLEASPSKHSRMQDAPAVNFSPKLEFIDGDLDDDIDPAMKEELDREVEDFARRLNSDWPERMQILSLGQDRRLLPISMNSNCSTRIYTGFDRR* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2899 356 Pfam Skp1 family, dimerisation domain 116 153 IPR016072 GO:0006511
Aev05g2899 356 PANTHER SKP1 1 267 IPR016897 GO:0006511
Aev05g2899 356 SMART skp1_3 14 115 IPR001232 GO:0006511
Aev05g2899 356 PANTHER OS03G0107000 PROTEIN 1 267 - -
Aev05g2899 356 SUPERFAMILY POZ domain 15 79 IPR011333 -
Aev05g2899 356 SUPERFAMILY Skp1 dimerisation domain-like 90 157 IPR036296 GO:0006511
Aev05g2899 356 Gene3D Potassium Channel Kv1.1; Chain A 10 160 IPR011333 -
Aev05g2899 356 Coils Coil 169 189 - -
Aev05g2899 356 Pfam Skp1 family, tetramerisation domain 17 79 IPR016073 GO:0006511
Aev05g2899 356 MobiDBLite consensus disorder prediction 215 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2899 Aev-Chr5 29801084 29804575 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2899 - - gmx:100775387 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2899 05 29801084 29804575 Aev05g2899 05 29801084 29804575 ECH