Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2898 ATGTGTTCATCTGGATTCTCAGCATCTTCCACTGCAGAAGAAGTTACTCTTGGCATCGATGGCACTGCCCTCACTGCTATCATCACAGGAGCAAACAGAGGAATTGGTGCTGAGACAGCACGAGTTTTTGCTTTGCGTGGAGTACACGTGATCATGGGGGTGAGGAATTTGAGTGCTGCAGAAGATGTCAAAGAAGCAATACTTAAGGAGCTTCCAACTGCTAAAGTTGATGTCATGGAGTTAGACCTCAGTTCAATGGAATCTGTTAGGAAATTTGTGTCACAGTTCAATTCCTCTGGCCTTCCATTGAACATCCTCATAAACAATGCAGCAGTTCTTGCAACCCCTTTCACTCTGTCCAAAGACAATATTGAACTGCAATTTGCCACAAACCACATAGGTCATTTTCTTCTGACAAATCTTCTGCTGGATACTATGAAGAAAACTGCAAATGAAAGTAAGATAGAAGGAAGAATCATCAATGTTGCCTCTGACGGTCACAAATTCACTTACCCTGAAGGAATTCAGTTTGACAAAATCAATGATGAATCCAGTTACAACAAATGGCATGGTTATGGACAATCAAAGCTTGCAAACATTTTACATGCCGGTGAACTCGCAAGGCGCCTCATTGAAGATGGTGTACTAGATGTAACTGCAAATTCTCTTCATCCTGGAGCTGTTGCCACCATATCTGAACCCTGA 705 0.4241 MCSSGFSASSTAEEVTLGIDGTALTAIITGANRGIGAETARVFALRGVHVIMGVRNLSAAEDVKEAILKELPTAKVDVMELDLSSMESVRKFVSQFNSSGLPLNILINNAAVLATPFTLSKDNIELQFATNHIGHFLLTNLLLDTMKKTANESKIEGRIINVASDGHKFTYPEGIQFDKINDESSYNKWHGYGQSKLANILHAGELARRLIEDGVLDVTANSLHPGAVATISEP* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2898 234 Gene3D - 20 232 - -
Aev05g2898 234 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 2 230 - -
Aev05g2898 234 Pfam short chain dehydrogenase 25 173 IPR002347 -
Aev05g2898 234 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 230 IPR036291 -
Aev05g2898 234 PANTHER RETINOL DEHYDROGENASE 2 230 - -
Aev05g2898 234 PRINTS Glucose/ribitol dehydrogenase family signature 25 42 IPR002347 -
Aev05g2898 234 PRINTS Glucose/ribitol dehydrogenase family signature 151 167 IPR002347 -
Aev05g2898 234 PRINTS Glucose/ribitol dehydrogenase family signature 101 112 IPR002347 -
Aev05g2898 234 PRINTS Glucose/ribitol dehydrogenase family signature 216 233 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2898 Aev-Chr5 29794596 29796639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2898 26 112 Lipid Metabolism Gene Families AT1G24470 35.632 4.03e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2898 - - cam:101490020 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2898 05 29794596 29796639 Aev05g2898 05 29794596 29796639 ECH