Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2870 ATGAAGAAAGTAGTTTTAGATGTGGACTTCTGTAATGACAGAATCAAGCAAAAAGCTATGAGGACAGTCTCTAGCCTTCATGGGATTGAGTCAGTGTCTGTGAACATGAAGGAGAAGAAAATGAGTTTAGTAGGGGAAGTGGATCCAGTGGATGTTGTAGGCAAATTAAGAAAGTGTTGCAAAGCTGAAATGGTTTCTGTTGGACCTGTCAAAGAAGATCAGAACCCAAACAATGATTCAACAAATATTATTGTTTCTTCATCATTATCTTATCCTCTCACTGTCTATGAAACATATCAAATTAGACCTCCTCATTATTACTGTGTTGGAACTGTAGAAGAAGATCCTCAGGGCTGTGTCATCTGCTAG 369 0.3821 MKKVVLDVDFCNDRIKQKAMRTVSSLHGIESVSVNMKEKKMSLVGEVDPVDVVGKLRKCCKAEMVSVGPVKEDQNPNNDSTNIIVSSSLSYPLTVYETYQIRPPHYYCVGTVEEDPQGCVIC* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2870 122 Pfam Heavy-metal-associated domain 16 59 IPR006121 GO:0046872
Aev05g2870 122 Gene3D - 1 73 - -
Aev05g2870 122 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 122 - -
Aev05g2870 122 SUPERFAMILY HMA, heavy metal-associated domain 4 60 IPR036163 GO:0046872
Aev05g2870 122 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2870 Aev-Chr5 29598842 29600812 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2870 - - adu:107491098 127.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2870 05 29598842 29600812 Aev05g2870 05 29598842 29600812 ECH
Aev05g2870 05 29598842 29600812 Aev09g2191 09 24726179 24727036 PCT