Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2828 ATGGAGTACAATGAAAAATCCGGTTCATCAAATGGGTGGGTAGAGGAGCCAGAATTACCCCTATTTTATGGTGAGGGAGTCAATGATTGGATCCAGAAGGAGATGAAATTCTTCGATTTTTGTAGAGCACCCGAAGAACACAGGCTCATAATGGCTGCGCTGCATCTGGAGGGTGATGCTTGGGAATGGTTCTTCGACTGGAAATCCAGCAAGGATGGATGCATCACATGGGAGCAATTTGTGGAAGCCATCCAACTCCAATTTGGAAGTAGAAACAAAGGGGAAATAGAGGAGGAAGAAGAAGAAGCAGAGCAGGAACTCATGAATTCACAGGTTGATGACAGAAGCATAGTAAATGCAAGTGGCGACGGCGTGATGAGCAACGATGATGGATCTCCGAATGGAACGTTCAATGACGAAGCAACCCGAGGAGATACTGGGGTATGCGGGAGGTCTCGATACTTGAGTGTGATGGATGAGCAAGATGCACTCCCAACGGCGGTGAAGTTGCAGGTACCGTCAGAGCCATTGAGTTCCAATCAAGTCGTGGTGGTGGATGGAAGTGTGACGGAGAGGAGTAGAGAGCTCCATGGAAGGTCCTGGAAGGGCGCTTGGAACCTTGGCGGCCACTCTAGACCATCGCTGGTGGCGCCCCTTACGCGGCCGTGGATGCTGGCGAGCAGGGAAGCTACGACTGAAGCTTGGGTGCGCGACGGTTGGCGAGTCCCATGGCCGGAGTTTGATGGCGAGGTGCTCGCAACGGTGGTGGTTGATGGAGCCGCGGTGAGAAGAGGAAGCGCCACCCTTAGTGAGTGGAGGGGCGACCGAGTCGGCTTGAAGTCGCAGCGGAGCATGGCGGTGAGTGGCGGCTGGAAAGAACCGTGGCCGGAGTTAGGCGGCGGGGTGTTTGCAAGGGCGGTGGTTGGTGGACCGTTGAAGCCATTGAGTGCAAGTCAATCTATGGTGGTGAGCGGCGGCCGCACCAGGCTGGCGGAATGGGAGATCGAAGCAAGGGCGACTAATATGAGAAGGGAAGGTCGAAGGTGGCAGCTGCGGGGAACAGGGATGGCTGCGCACCCAGATCCGCCATGGATGCCGGTGGGCAAAGAATCTCCGGCGGAAGAAGGGAAGTGCGGCGGCTGGCGAGGCTCGAGTTCGGAGTTAAATGTAGGATATGTTGCAACGGTGGGGTTTGGTGGATCACCAGCGAGAGAGGCGCGCGGTGGTGGAGCTTGGGAAGAAAGTGGCGCTGTGAGAGAAAGGAGCAGGGAGCCTGAAGGATGCTTCTGGAAGAAGCATAATTGGGTTGATTGGAAAGCAGCCCTAGAGGCTCTTGAAAAACTGGGCCAATGGAACCCTTACCCAGTAAGCCCAATGCAAACCCAAATCATTAATACAAGAAGCTGGGCCCTTAATTGTTCAATTGTAGCATGCCTCTTCTATGAGCTCATAAATTTTGAAGCAAAGGAATCAAATCCAAACAGCTTGGAGAAATTAAAAGGACTTCGTACTGGAATTGCTGTGTATTGGGGCCAAAATGGCAATGAAGGGTCCTTATCAGATGCATGCAATACTCACAACTACCAAATTGTGAACATAGCATTCTTGTCCAGTTTTGGCAATGGCATAGACCCTCAACTGAACCTTGCTGGCCACTGTGACCCCTCTTCCAATGGCTGCACAGGGTTAAGCAGTGAAATCCATACATGCCAGGGCCTAGGAATTAAGGTCCTCCTCTCCCTTGGAGGTGGTGCTGGAAGCTACTCTCTCAACTCTGCTGATGAAGCCACACAGCTTGCAACTTACCTTTGGAACAACTTCCTTGGAGGGAGTGGTTCAAGTTCAAGGCCATTAGGTGATGCTGTTTTGGATGGCATTGATTTTGACATTGAAGCAGGTGGGGATCAGCATTGGGATGAACTTGCAAGGGCACTTAAAGGGTTCAACCAACAGATTTACCTTTCTGCAGCACCACAATGCATTATCCCTGATGCCCATTTGGATTCTGCTATCCAAACTGGTATATTTGATGCTGTTTGGGTTCAGTTCTATAACAACCCTCCATGCCAGTACTCTAGTGGAAACACTGATAGTTTGATTAGTTCATGGAATCAATGGAGCTCTAGGACATCTAGCCAACTCTTCATGGGGTTGCCTGCATCTGAGACAGCTGCTAATGGTGGTTTTGTTCCTGCTGATGTTCTGACTTCTCAGATTCTTCCTACTATAAAGGGGTCTCAGAACTATGGTGGTGTCATGCTCTGGGACAGAAACCATGATAATGGTTATAGTGGTGCTATTATTGCAAGTCTTTGA 2316 0.5082 MEYNEKSGSSNGWVEEPELPLFYGEGVNDWIQKEMKFFDFCRAPEEHRLIMAALHLEGDAWEWFFDWKSSKDGCITWEQFVEAIQLQFGSRNKGEIEEEEEEAEQELMNSQVDDRSIVNASGDGVMSNDDGSPNGTFNDEATRGDTGVCGRSRYLSVMDEQDALPTAVKLQVPSEPLSSNQVVVVDGSVTERSRELHGRSWKGAWNLGGHSRPSLVAPLTRPWMLASREATTEAWVRDGWRVPWPEFDGEVLATVVVDGAAVRRGSATLSEWRGDRVGLKSQRSMAVSGGWKEPWPELGGGVFARAVVGGPLKPLSASQSMVVSGGRTRLAEWEIEARATNMRREGRRWQLRGTGMAAHPDPPWMPVGKESPAEEGKCGGWRGSSSELNVGYVATVGFGGSPAREARGGGAWEESGAVRERSREPEGCFWKKHNWVDWKAALEALEKLGQWNPYPVSPMQTQIINTRSWALNCSIVACLFYELINFEAKESNPNSLEKLKGLRTGIAVYWGQNGNEGSLSDACNTHNYQIVNIAFLSSFGNGIDPQLNLAGHCDPSSNGCTGLSSEIHTCQGLGIKVLLSLGGGAGSYSLNSADEATQLATYLWNNFLGGSGSSSRPLGDAVLDGIDFDIEAGGDQHWDELARALKGFNQQIYLSAAPQCIIPDAHLDSAIQTGIFDAVWVQFYNNPPCQYSSGNTDSLISSWNQWSSRTSSQLFMGLPASETAANGGFVPADVLTSQILPTIKGSQNYGGVMLWDRNHDNGYSGAIIASL* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2828 771 SUPERFAMILY (Trans)glycosidases 505 762 IPR017853 -
Aev05g2828 771 Gene3D Glycosidases 504 770 - -
Aev05g2828 771 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 504 771 IPR001223 GO:0005975
Aev05g2828 771 MobiDBLite consensus disorder prediction 124 141 - -
Aev05g2828 771 CDD GH18_hevamine_XipI_class_III 504 769 IPR045321 -
Aev05g2828 771 Coils Coil 86 113 - -
Aev05g2828 771 MobiDBLite consensus disorder prediction 354 378 - -
Aev05g2828 771 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 623 631 IPR001579 GO:0004553|GO:0005975
Aev05g2828 771 PANTHER ENDOCHITINASE 504 769 - -
Aev05g2828 771 MobiDBLite consensus disorder prediction 124 144 - -
Aev05g2828 771 Pfam Glycosyl hydrolases family 18 506 760 IPR001223 GO:0005975
Aev05g2828 771 PANTHER ACIDIC ENDOCHITINASE 504 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2828 Aev-Chr5 29304061 29310084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2828 472 771 Glycoside Hydrolase AT5G24090 56.209 1.21e-112 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2828 K01183 - gmx:100783329 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2828 05 29304061 29310084 Aev09g2157 09 24552662 24557345 ECH
Aev05g2828 05 29304061 29310084 Aev05g2828 05 29304061 29310084 ECH
Aev05g2828 05 29304061 29310084 Aev09g2158 09 24560448 24561302 PCT