Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g2027 ATGAGCGATGTTTCGGGTCCTGATTTGATCAGCGACCTACCTCAGAGCATTATAGAGAGCATTCTGGTACGACTTCCAATTAGAGATGCTGTGAGAACTAGCATTTTATCGAGCAAATGGAGGTTTAAATGGGCTTCCATTACTCAACTTGTATTTGATGAGAAATGTGCCCCATCTTGTAATGACGGAGATGTTGTGGAGAAGAGTGTTATCAAGTTCGTCACTAGGCTGCTTTTTCTTCACCAAGGACCAATTCATAAGTTCCAAATCACGATTTCGTTCTTGCAGAGCTGCCCTGAAATAGATCAGTGGATCCTTTTCCTTTCAAGGAATGATATCAAAGAATTGGTTCTTGAATTGGGAGAAGGTGAATTTTTTAGAATACCTTCCTGCCTTTTCAATTGTAAGAAATTGACTCGCCTTGAGCTTTTCCGCTGTGAGTTGGATCCGCCCTTAACTTTTAGAGGATTTGCGTGTTTGAAGAGCTTAAACCTTCATCAGGTTTTAATATCCCCTGATGCCATTGAGGGCCTTATTTCCAGCTGCCCTCTTTTGGAGAGCTTATCGCTGTCCTACTTTGATAGTTTAGCTCTTAGTATCTGTGCTCCGAACCTCAAATACTTGCATCTTGAAGGTGAGTTCAGGGATATATGTCTCGAAGATACTCCACTTTTGACTGAAATATCAGTTGCTATGTATATGACTGATGACATTGCTGAGCACTTTGAGCAAAGCTCAAATTGCAATTTTGTCAAGTTTCTTGGTGGTGTGCCTAATCTTGAGAGGCTTGTTGGGCACATCTACTTTACTAAGTATTTGAGCATAGGTAATGACCCAGGGCATCTTCCAATAATGTACAACAAGTTGGAGACTATTGAATTATATCAAGTAAGTTTTGAAGATATGAAGGAGATACTCGTCGTTCTTCGCTTGATTACCAGCTCTCCCAATCTAAAGGAACTACAAATTTCTGGTTCATCAAGCATACCAACTGCTACAGATGCCCCAGATTTGGATTTCTGGGAAAAAGAATGCCCTTCAAGTTCTACACTTAGCCAGCTTAGAGTTGTGAAGTTGACGGATATGTGTGGTGTGCCACATGAGATGGAACTCATCAAATTTTTGCTTGTCTCTTCTCCTGTGCTTGAGATAATGAGTATCACTCCTTGTGTATATGTTGCGGATAGTCAATTGAAAATGTTGATCGAATTGGTGAAATTTCGAAGAGCTTCTGCCAAAGCAGAAATTGTTTTTGTCCGCGAGTAA 1266 0.406 MSDVSGPDLISDLPQSIIESILVRLPIRDAVRTSILSSKWRFKWASITQLVFDEKCAPSCNDGDVVEKSVIKFVTRLLFLHQGPIHKFQITISFLQSCPEIDQWILFLSRNDIKELVLELGEGEFFRIPSCLFNCKKLTRLELFRCELDPPLTFRGFACLKSLNLHQVLISPDAIEGLISSCPLLESLSLSYFDSLALSICAPNLKYLHLEGEFRDICLEDTPLLTEISVAMYMTDDIAEHFEQSSNCNFVKFLGGVPNLERLVGHIYFTKYLSIGNDPGHLPIMYNKLETIELYQVSFEDMKEILVVLRLITSSPNLKELQISGSSSIPTATDAPDLDFWEKECPSSSTLSQLRVVKLTDMCGVPHEMELIKFLLVSSPVLEIMSITPCVYVADSQLKMLIELVKFRRASAKAEIVFVRE* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g2027 421 ProSiteProfiles F-box domain profile. 7 41 IPR001810 GO:0005515
Aev05g2027 421 SUPERFAMILY RNI-like 105 330 - -
Aev05g2027 421 SMART 9598neu4hmm 348 419 IPR006566 -
Aev05g2027 421 PANTHER F-BOX PROTEIN-LIKE 6 392 - -
Aev05g2027 421 Pfam FBD 351 387 IPR006566 -
Aev05g2027 421 SUPERFAMILY F-box domain 6 82 IPR036047 GO:0005515
Aev05g2027 421 Gene3D Ribonuclease Inhibitor 128 409 IPR032675 -
Aev05g2027 421 PANTHER - 6 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g2027 Aev-Chr5 19276080 19277622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g2027 4 215 EF-hand Containing Proteins AT5G41840 25.410 2.50e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g2027 - - gmx:100781833 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2027 05 19276080 19277622 Aev05g2027 05 19276080 19277622 ECH