Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1801 ATGGGCTTCAGATCCCTCTTCAATTGTAAGAAGAAACTCACAAAGAAATCATCATCATCCTCAAATGTTGGCACTACCGCCAACCCCACCCCTGCCACTATAATTCGATCGTCGTCGTTGTTAGTGCACTCTCGCGCTGAGTTTGTGGCTGAATTAAAACAAGTCTTCAAAAAATTCGACGTCAATGGCGACGAGATGATCTCATCCTCCGAACTTGGGTCCATAATGAGGAGCCTTGGACAGCCTGCGAGCGAGGAAGAGCTCGATAACATGATCAGAGAGGTGGATGCTGATGGTGACGGATACATCAGCATTGACGAGTTCATCGAGTTGAATACGAAAGACGTCGATTCCAATGAGGTTTTGGAGAACCTGAAGGATGCGTTCTCGATTTTCGACGCCGATGGGAATGGCTCTATCACAGTGGAGGAATTGCACAATGTGATGGCTAGCCTCGGCGAGTCGTGCTCCGTTGACGAATGTCGAAAAATGATCAGTAGCGTCGACAATGATGGCGATGGCATGATCGACTTCGACGAGTTCACGAAGATGATGATGGGCTCTCGCTACGCATCAATCGAAAGATCGGTTAATGATGGTAAAATGTAA 609 0.4745 MGFRSLFNCKKKLTKKSSSSSNVGTTANPTPATIIRSSSLLVHSRAEFVAELKQVFKKFDVNGDEMISSSELGSIMRSLGQPASEEELDNMIREVDADGDGYISIDEFIELNTKDVDSNEVLENLKDAFSIFDADGNGSITVEELHNVMASLGESCSVDECRKMISSVDNDGDGMIDFDEFTKMMMGSRYASIERSVNDGKM* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1801 202 Gene3D - 115 197 - -
Aev05g1801 202 Gene3D - 10 114 - -
Aev05g1801 202 ProSiteProfiles EF-hand calcium-binding domain profile. 120 155 IPR002048 GO:0005509
Aev05g1801 202 ProSiteProfiles EF-hand calcium-binding domain profile. 47 82 IPR002048 GO:0005509
Aev05g1801 202 ProSiteProfiles EF-hand calcium-binding domain profile. 156 191 IPR002048 GO:0005509
Aev05g1801 202 SMART efh_1 51 79 IPR002048 GO:0005509
Aev05g1801 202 SMART efh_1 124 152 IPR002048 GO:0005509
Aev05g1801 202 SMART efh_1 87 115 IPR002048 GO:0005509
Aev05g1801 202 SMART efh_1 160 188 IPR002048 GO:0005509
Aev05g1801 202 ProSiteProfiles EF-hand calcium-binding domain profile. 83 118 IPR002048 GO:0005509
Aev05g1801 202 ProSitePatterns EF-hand calcium-binding domain. 133 145 IPR018247 -
Aev05g1801 202 CDD EFh 125 186 IPR002048 GO:0005509
Aev05g1801 202 Pfam EF-hand domain pair 51 110 IPR002048 GO:0005509
Aev05g1801 202 Pfam EF-hand domain pair 123 185 IPR002048 GO:0005509
Aev05g1801 202 PANTHER CALCIUM BINDING PROTEIN 22 193 - -
Aev05g1801 202 SUPERFAMILY EF-hand 47 187 IPR011992 -
Aev05g1801 202 ProSitePatterns EF-hand calcium-binding domain. 96 108 IPR018247 -
Aev05g1801 202 ProSitePatterns EF-hand calcium-binding domain. 169 181 IPR018247 -
Aev05g1801 202 CDD EFh 51 111 IPR002048 GO:0005509
Aev05g1801 202 PANTHER CALCIUM-BINDING PROTEIN CML25-RELATED 22 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1801 Aev-Chr5 15633936 15634544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1801 6 189 EF-hand Containing Proteins AT1G24620 57.297 3.12e-64 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1801 K13448 - gmx:100813092 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1930 06 16318773 16319201 Aev05g1801 05 15633936 15634544 PCT