Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1431 ATGAGTTCCGGTGGATACTCTGTAGAAGTTACTGGCTTGTCGCCAAATGCTACTGAGAAAGATGTCCACGATTTCTTCGCTTTCTCTGGCGCCATTGAGCACGTTGAAATCGTTAGGTCTGGTGATTGTGCTTGTACTGCTTACGTGACTTTCAGAGATGCATATTCTCAAGAAACTGCTTGCTTGCTCAGTGGAGCCACTATTTTAGATCAACGTGTCTGCATAACGCGCTGGGGTCAGCATGAAGATGGATATGGTTTTTGGAACCGTCCTTCCTACAGTCACGAGGAGGAGACTACATCGACTACACAACATAACAATCAATTCGTTTACTCTGCTGGAGAAGCCGTTACGGTGGCCCAAGAAGTCGTGAAGACAATGCTAGCAAAGGGATATGTTCTCAGTAAGGATGCATTAGCCAAGGCTAAAGAGTTTGACGAGTCTCACCAGGTTTCTGCCACTGCAACAGCAAGAGTTTCTGAGCTGAGCCAGAGAATTGGCCTTGCCGACAAGATATCTGCAGGTGTTGAAGCTGTTAAATCTGTGGATCAGAGATACAATGTCTCCGAAACGGCCAAAGCAGCTGCATCCGCAACGGGAAGATCAGTAGCAGCTGCTGCGAACTCTGTGGTAAATAGTAGCTATTTTTCAAAGGGAGCCTTGTGGCTGTCAGGTGCTCTAACCCGAGCAGCTCAAGCTGCTTCTGATTTGGGCACTCGCAGCAGCGATGGGCGGTAA 738 0.481 MSSGGYSVEVTGLSPNATEKDVHDFFAFSGAIEHVEIVRSGDCACTAYVTFRDAYSQETACLLSGATILDQRVCITRWGQHEDGYGFWNRPSYSHEEETTSTTQHNNQFVYSAGEAVTVAQEVVKTMLAKGYVLSKDALAKAKEFDESHQVSATATARVSELSQRIGLADKISAGVEAVKSVDQRYNVSETAKAAASATGRSVAAAANSVVNSSYFSKGALWLSGALTRAAQAASDLGTRSSDGR* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1431 245 Gene3D - 2 83 IPR012677 -
Aev05g1431 245 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 242 - -
Aev05g1431 245 SMART rrm1_1 7 77 IPR000504 GO:0003723
Aev05g1431 245 SUPERFAMILY RNA-binding domain, RBD 5 79 IPR035979 GO:0003676
Aev05g1431 245 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 242 - -
Aev05g1431 245 CDD RRM_Vip1_like 8 76 IPR034360 -
Aev05g1431 245 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 71 IPR000504 GO:0003723
Aev05g1431 245 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 80 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1431 Aev-Chr5 10561763 10563245 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1431 - - gsj:114378905 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1431 05 10561763 10563245 Aev05g1431 05 10561763 10563245 ECH