Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1399 ATGGAAGAAGAAGAAGCAGCAAAGTACGCAGAGAAGAAAGAATATATATGGAGTTGGGGTGCTGGAACGGAGGGTCAGTTAGGTAATTGCAAGCTTGAGGATGAGCATCTTCCTCAACTCCAACTCTCTCTCTCTTCCTTCTCCTCCCTCGCCTGCGGCGCCGCCCACGTCATCGCCTTGACCTCCAATGGGAAGGTATTGTCATGGGGAAGGGGAAACTCTGGCCAACTAGGCCATGGAGAGGTTGTTAATAACTCATTGTATCCTAAGCCTGTAACATCTTTGGACAGTTACTTCATAACAAATGTCTCTGCTGGTTGGAGCCACTCTGGTTTTGTTTCAGATACTGGGTGCTTGTTCACTTGTGGTGATGGCTCTTTTGGTCAGCTTGGTCTTGGGGATTATGCCTCACACAGCTCCCCTGTTAAAGTGTCTCGGTTTGATGATCAGCGTGTCGCACGGGTAGCTTGCGGCATGCGCCATTCACTTGTCTTGTTGGAAGATTGTTCATCAAACCAAGTTTATGGATTTGGCTCTGGGAAGCGCGGTCAACTAGGCGTTTCCAGAGATAGGATCAAATCTATTAATCTTCCTGAAGTTGTTAGTGGCTTTGAAGATGTAGAAATAGTCGATATTGCAGCAAATGGAGATCATAGTGCTGCAGTATCTGTTGATGGGCATCTTTACACATGGGGAAGAGGATTCAAGGGCTTTGAAGATGCTCAATCTCCTCAACGCTTGAACACCACTTTGAATTTTGCCAAAGTCAGTATGGGATGGAACCATGCTTTAGCTTTGACTGGTGAGGGGGAGGCTTATATACTTGGTGGCAACCATCTTGGAGTGCTCAATGATCATCAGAATATGAACCCAGCAAAGCAGTTACCTGATTCAAGAGAAGCCAGTTTGGAAAAAGTCCCAGGCCTCAACGGGACAAAGATTGTTGACATTGCTACCGGTGCCGAACACTCTGCCCTCATCACAGAGAATGGAGAAGTAAAGACATGGGGTTGGGGTGAGCATGGTCAACTTGGCTTGGGGGATACTTGTGACAGAGCAAGTCCTGTTACAACTGCAGTGCACAATGAAGCCATAGGCTCCAATAATGGTCCTCACAAATTTGGGAACCAGGAAGGAGAAGAGGGACATGGATATGGATATGTTCCTCTTTACAGTCTTACCAACTCAGATGAGGAGTGA 1200 0.4692 MEEEEAAKYAEKKEYIWSWGAGTEGQLGNCKLEDEHLPQLQLSLSSFSSLACGAAHVIALTSNGKVLSWGRGNSGQLGHGEVVNNSLYPKPVTSLDSYFITNVSAGWSHSGFVSDTGCLFTCGDGSFGQLGLGDYASHSSPVKVSRFDDQRVARVACGMRHSLVLLEDCSSNQVYGFGSGKRGQLGVSRDRIKSINLPEVVSGFEDVEIVDIAANGDHSAAVSVDGHLYTWGRGFKGFEDAQSPQRLNTTLNFAKVSMGWNHALALTGEGEAYILGGNHLGVLNDHQNMNPAKQLPDSREASLEKVPGLNGTKIVDIATGAEHSALITENGEVKTWGWGEHGQLGLGDTCDRASPVTTAVHNEAIGSNNGPHKFGNQEGEEGHGYGYVPLYSLTNSDEE* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1399 399 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 14 63 IPR000408 -
Aev05g1399 399 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 270 330 IPR000408 -
Aev05g1399 399 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 226 269 IPR000408 -
Aev05g1399 399 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 155 165 IPR000408 -
Aev05g1399 399 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 64 116 IPR000408 -
Aev05g1399 399 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 331 355 IPR000408 -
Aev05g1399 399 Gene3D - 296 368 IPR009091 -
Aev05g1399 399 Gene3D - 3 295 IPR009091 -
Aev05g1399 399 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 16 362 - -
Aev05g1399 399 PANTHER OS01G0777800 PROTEIN 16 362 - -
Aev05g1399 399 Pfam Regulator of chromosome condensation (RCC1) repeat 314 343 - -
Aev05g1399 399 SUPERFAMILY RCC1/BLIP-II 15 187 IPR009091 -
Aev05g1399 399 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 317 327 IPR000408 -
Aev05g1399 399 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 117 168 IPR000408 -
Aev05g1399 399 SUPERFAMILY RCC1/BLIP-II 170 358 IPR009091 -
Aev05g1399 399 Pfam Regulator of chromosome condensation (RCC1) repeat 173 222 IPR000408 -
Aev05g1399 399 Pfam Regulator of chromosome condensation (RCC1) repeat 16 60 IPR000408 -
Aev05g1399 399 Pfam Regulator of chromosome condensation (RCC1) repeat 117 165 IPR000408 -
Aev05g1399 399 Pfam Regulator of chromosome condensation (RCC1) repeat 63 112 IPR000408 -
Aev05g1399 399 PRINTS Chromosome condensation regulator RCC1 signature 47 60 IPR000408 -
Aev05g1399 399 PRINTS Chromosome condensation regulator RCC1 signature 155 171 IPR000408 -
Aev05g1399 399 PRINTS Chromosome condensation regulator RCC1 signature 259 277 IPR000408 -
Aev05g1399 399 PRINTS Chromosome condensation regulator RCC1 signature 15 31 IPR000408 -
Aev05g1399 399 PRINTS Chromosome condensation regulator RCC1 signature 326 347 IPR000408 -
Aev05g1399 399 PRINTS Chromosome condensation regulator RCC1 signature 66 82 IPR000408 -
Aev05g1399 399 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 172 225 IPR000408 -
Aev05g1399 399 MobiDBLite consensus disorder prediction 362 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1399 Aev-Chr5 10155830 10159330 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1399 - - adu:107490763 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1399 05 10155830 10159330 Aev05g1399 05 10155830 10159330 ECH