Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1356 ATGGCCGTCGTGGCCACCACCAAGACCGAATTCTTGTTCTTCCTCTTCCCAACTCGCCACTCTTCTCTCTCACTCGCTCCCTCCTCTCTTCTTCTTCGCCGTCGTTCCCTTCACTCTTCCCTCCGATTCCGAGTCTCCTTCAAATCCCCTACCTCATCCTTCCGCGCTGTCTCCGATGCGGAGGAAGACGATGAGGAAGAAGAGTACGAAGAGGAGTATGAAGATGAGGACGATGACGAAGACGTTGCGGCTGATGAATACGACGACGTTTCAGAAGATGTGTACGACGGCGCCGTTTCGGATGAAGGCGAAGCAGCATTCGAGACTGTTGGACGGAACGACGGGTCGTTCAAGTGGCAGAGAGTCGAGAAGCTCTGCAAAGAGGTTAGAGAGTTCGGTTCTGATATCATTGACGCTGAAGAGCTTGCTTCCATTTACGATTTCCGAATCGACAAGTTTCAGCGGCTTGCGATTCAGGCTTTTCTGAGAGGCTCGTCGGTGGTGGTGTCTGCTCCGACGAGTAGCGGGAAGACTCTGATTGCGGAGGCTGCTGCGGTGGCGACGGTGGCTAGGGGACGCCGGATATTCTATACGACGCCGCTCAAGGCATTGTCCAATCAGAAGTTTCGTGAATTCCGGGAGACTTTCGGTGACAGCAATGTTGGTCTTCTAACTGGAGATTCTGCTGTCAACAAGGATGCTCAGGTTTTGATTATGACCACAGAGATCTTACGCAACATGTTGTATCAGAGTGTTGGTAATATTTCTTCTGGAAGTCGGCTTCTCCATGTTGATGCAATAGTTTTGGATGAAGTTCATTACCTAAGTGACATATCTCGCGGTACAGTTTGGGAAGAGATTGTCATTTATTGCCCTAAAGAAGTTCAACTTATTTGTCTGTCCGCAACCGTTGCAAACCCTGATGAGTTGGCTGGTTGGATTGGTCAGATTCATGGTACAACAGAGTTGGTTACATCATCAAAACGTCCAGTTCCGTTGACTTGGCATTTCTCCATGAAAAATTCCTTATTACCCCTTCTTGATGAGAAGGGAACACGAATGAACAGGAAGCTGTCTCTCAATTATTTACAACTTCAAGGTGCAGGAGCTAAACCTTACAAGGACGATTGGTCAAGAAAAAAGAGTTCCCGAAGAAGAGGAACTCAAACAAGTTATGATAGTGATGGTAGCATGTTTGAACAACGTTCTCTTTCAAAGAATGATATAAATGCAATTCGTCGCTCACAGGTTCCTCAAATAATTGATACTCTATGGCAGCTTCAGTCTAGGGATATGTTGCCAGCTATTTGGTTTATATTTAGTAGGAAGGGTTGTGATGCAGCTGTGCAATATGTTGAAAATTGCAAACTTTTAGATGACTGTGAAACAAGTGAGGTTGAACTAGCATTGAAGAGGTTTCGCATCCAGTATCCTGATGCTGTCCGAGAAATAGCTGTGAGAGGACTTATGCAAGGGGTTGCTGCGCATCATGCTGGATGTCTACCTTTATGGAAGGCATTCATCGAAGAATTGTTCCAAAGAGGGCTTGTCAAGGTTGTTTTCGCTACGGAAACCCTGGCTGCGGGAATCAATATGCCAGCTAGAACATCTGTTATTTCATCTCTCAGTAAAAGAGCTGATAGTGGACGTATCCAACTAAGTTCAAATGAACTGCTTCAGATGGCTGGGCGTGCTGGACGCAGGGGCATTGATGATAGTGGCCATGTGGTGCTCATACAGACTCCCAATGAAGGTGCTGAAGAGTGCTGCAAGGTGCTGTTTGCTGGACTTGAGCCCCTAGTGTCACAGTTTACTGCTTCATATGGAATGGTTTTGAATCTTCTTGCCGGTGTAAAAGCCATTCATAGGCCGAATGAGTCAGATGACACGAGACCTTTGTCAGGGAGAACTTTGGAAGAAGCTAGGAAGTTAGTTGAGCAGAGTTTTGGAAATTATGTTAGTAGCAATGTTATGCTGGCTGCTAAAGAGGAAGTTAAAAAAATTGAGAAAGAAATCAAGTTGCTGATGGCAGAAATCACTGATGAAGCCATAGATAGAAAAAGCAGAAAGGCTCTATCACAGCGACAATATAAGGAGATTGCAGAGTTACAGGAAGAATTAAGGGCAGAGAAACGTACTCGGACTGGATTGCGGAAACAGATGGAAGCAAAGAGAATATCTGCCCTAAAACCTTTATTGGAAGAGCCCGAGAGTGGACATTTGCCATTTTTGTGCTTGCAGTATATAGATTCTGAAGGAGTTCAACATTCAATGCCTGCTGTGTTCTTGGGGAAGGTTGACTCCCTTAACGCTTCAAAACTCAAGGACATGATTTCTTCCAATGATTCTTTTGCATTAGATTTAGGAGATTCAGAGTCAAGCGTTACCGATTCTGAATTGAATGAAGGCCCTGAACTATCATATCATGTGGCTCTTGGTTCGGATAACTCTTGGTATCTATTTACAGAGAAATGGATTAAAACAGTATACGCGACCGGCTTTCCTAACGTTCCATTGGCTCAGGGCGATGCTCTACCTCGTGAAATTATGAGTACTCTTCTTGACAAGGAAGAAATGAAGTGGGACAAGCTTGCTCAATCTGAAAATGGCGGTTTATGGTTCATGGAAGGATCTCTAGATACATGGTCATGGAGTTTGAATGTTCCTGTTTTGAGCAGCTTCGCTGAAAATGATGAGCTACTGCTAAAGTCCGAAGCCTACAAAGATGCGATTCAACGATACAAGGATCAAAGAAACAAAGTTTCACGCTTGAAGAAAAAGATCTCTCGTACCGAAGGCTATAAAGAATACAGTAAAATCATAGACATGGTCAAGTTCACCGAGGAGAAAATCAAGCGCCTGCAGAATAGATCGCAGCGTTTGATTAATCGTATAGAACAAATTGAACCCTCAGGATGGAAGGAGTTCATGCAGGTCAGCAATGTCATACATGAAACCAGAGCTCTAGATACTAATACACAGGTCATATTTCCACTCGGCGAAACCGCAGCCGCAATTCGAGGTGAAAATGAGCTGTGGCTCGCAATGGTTCTTCGCAGCAAGATTTTACTGGAACTAAAGCCTCCACAACTCGCTGCAGTTTGCGCGAGCTTGGTCTCTGAGGGTATCAAACTCCGACCGTGGAAAAACAACAGTTACATCTACGAGCCATCCGCAACCGTAATCAATGTGGTAAAGTTATTGGATGAGCAAAGAAGTGCACTCTTTTCCATTCAGGAGAAACATGGGGTGATGATATCTTGTGGTTTGGATAGCCAGTTTTGTGGCATGGTTGAAGCATGGGCTTCCGGGTTGACATGGAGAGAGATAATGATGGATTGCGCCATGGATGACGGTGATCTTGCTCGGCTCCTTCGACGCACCATCGATCTGTTAGCTCAGATTCCGAAATTGCCGGATATCGATCCATTGTTGCAGCGCAATGCTAAGGCTGCAGGAGAGGTCATGGACCGGCCTCCAATTAGTGAACTTGCTGGCTAG 3501 0.4533 MAVVATTKTEFLFFLFPTRHSSLSLAPSSLLLRRRSLHSSLRFRVSFKSPTSSFRAVSDAEEDDEEEEYEEEYEDEDDDEDVAADEYDDVSEDVYDGAVSDEGEAAFETVGRNDGSFKWQRVEKLCKEVREFGSDIIDAEELASIYDFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNISSGSRLLHVDAIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGTTELVTSSKRPVPLTWHFSMKNSLLPLLDEKGTRMNRKLSLNYLQLQGAGAKPYKDDWSRKKSSRRRGTQTSYDSDGSMFEQRSLSKNDINAIRRSQVPQIIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYVENCKLLDDCETSEVELALKRFRIQYPDAVREIAVRGLMQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTSVISSLSKRADSGRIQLSSNELLQMAGRAGRRGIDDSGHVVLIQTPNEGAEECCKVLFAGLEPLVSQFTASYGMVLNLLAGVKAIHRPNESDDTRPLSGRTLEEARKLVEQSFGNYVSSNVMLAAKEEVKKIEKEIKLLMAEITDEAIDRKSRKALSQRQYKEIAELQEELRAEKRTRTGLRKQMEAKRISALKPLLEEPESGHLPFLCLQYIDSEGVQHSMPAVFLGKVDSLNASKLKDMISSNDSFALDLGDSESSVTDSELNEGPELSYHVALGSDNSWYLFTEKWIKTVYATGFPNVPLAQGDALPREIMSTLLDKEEMKWDKLAQSENGGLWFMEGSLDTWSWSLNVPVLSSFAENDELLLKSEAYKDAIQRYKDQRNKVSRLKKKISRTEGYKEYSKIIDMVKFTEEKIKRLQNRSQRLINRIEQIEPSGWKEFMQVSNVIHETRALDTNTQVIFPLGETAAAIRGENELWLAMVLRSKILLELKPPQLAAVCASLVSEGIKLRPWKNNSYIYEPSATVINVVKLLDEQRSALFSIQEKHGVMISCGLDSQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLAQIPKLPDIDPLLQRNAKAAGEVMDRPPISELAG* 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1356 1166 MobiDBLite consensus disorder prediction 59 82 - -
Aev05g1356 1166 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 30 1162 - -
Aev05g1356 1166 MobiDBLite consensus disorder prediction 56 82 - -
Aev05g1356 1166 Coils Coil 937 964 - -
Aev05g1356 1166 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 158 322 IPR014001 -
Aev05g1356 1166 CDD SF2_C_Ski2 413 581 - -
Aev05g1356 1166 SMART ultradead3 146 336 IPR014001 -
Aev05g1356 1166 Gene3D - 944 1158 - -
Aev05g1356 1166 Gene3D - 330 600 IPR027417 -
Aev05g1356 1166 MobiDBLite consensus disorder prediction 372 397 - -
Aev05g1356 1166 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 30 1162 - -
Aev05g1356 1166 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 416 615 IPR001650 -
Aev05g1356 1166 MobiDBLite consensus disorder prediction 373 388 - -
Aev05g1356 1166 Pfam DEAD/DEAH box helicase 153 305 IPR011545 GO:0003676|GO:0005524
Aev05g1356 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 583 IPR027417 -
Aev05g1356 1166 SMART helicmild6 483 569 IPR001650 -
Aev05g1356 1166 Coils Coil 693 720 - -
Aev05g1356 1166 Gene3D - 112 329 IPR027417 -
Aev05g1356 1166 SMART DSHCT_2 991 1165 IPR012961 -
Aev05g1356 1166 Coils Coil 658 678 - -
Aev05g1356 1166 Coils Coil 897 927 - -
Aev05g1356 1166 Pfam DSHCT (NUC185) domain 995 1161 IPR012961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1356 Aev-Chr5 9724563 9730554 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1356 K26077 - gmx:100780908 1810.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1356 05 9724563 9730554 Aev05g1356 05 9724563 9730554 ECH