Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1355 ATGGCTCTGTCACGCATATCATCATCATCTCAGAAATCAAATCTTCTGAGACCAATCTCCACCGCCTTATCGCTCCGCCGCTTAATCTCCTCCGACTCCACCGCCACAATCACCATAGAGACCTCCGTCCCTTTCACCGCCCACAAATGCGACGCGCCTTCACGCGCCGTCGACACCACCCCGAAGGAGCTCTTCTCCTTCTTCCGCGACATGGCGACGATGCGCCGAATGGAGATCGCCGCCGACTCACTGTACAAGGCCAAGCTTATCCGCGGCTTCTGCCACCTCTACGACGGCCAGGAGGCAGTCGCCGTCGGCATGGAGGCCGCCATCACCCGCCGCGACTGCATCATCACTGCCTACCGCGACCACTGCACCTTCGTCGCCCGTGGCGGCTCCCTGGTCGAGGTCTTCGGCGAGCTCATGGGCCGCAGCACCGGCTGCTCCAAGGGCAAAGGTGGCTCCATGCACCTCTACCGCAAGGAGGCCGGATTCTACGGCGGACATGGTATCGTCGGAGCTCAGGTGCCTCTTGGTTGCGGGATGGCTTTTGCCCAGAAGTACTCTAAGGAGGAGCATGTGACCTTTACTTTGTATGGTGATGGTGCTGCCAATCAGGGGCAGTTATTTGAGGCGCTTAATATGGCGGCACTTTGGGACCTACCTGCGATCTTGGTCTGCGAGAATAATCACTATGGGATGGGGACGGCGGAGTGGAGGGCTGCTAAGAACCCTGCTTATTACAAGCGCGGGGATTATGTTCCTGGGTTGAAGGTTGATGGCATGGATGTTCTTGCTGTGAAACAAGCTTGCAAATTTGCAAAGGAGCATGCTTTGAAAAATGGGCCCCTTATTCTCGAGATGGACACCTACAGATACCACGGCCACTCCATGTCCGATCCTGGCAGCACATATCGATCACGTGACGAAATTTCTGGTGTGAGACAGGAGCGAGATCCGATTGAGAGAGTAAGAAAGCTGTTATTGGCTCACGATATTGCTTCTGAAAAGGAGTTAAAGGACATTGAGAAGGAAATTAGAAAAGAAGTTGACGAAGCTATTGCTAAAGCAAAGGAGAGCCCAATGCCAGACCCATCTGAGCTATTTGCAAATGTTTATGTTAAGGGTTTAGGGGCTGAGTCATTTGGTGCTGATAGGAAAGAATTAAGAGCTACTTTACCATAA 1185 0.5342 MALSRISSSSQKSNLLRPISTALSLRRLISSDSTATITIETSVPFTAHKCDAPSRAVDTTPKELFSFFRDMATMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRRDCIITAYRDHCTFVARGGSLVEVFGELMGRSTGCSKGKGGSMHLYRKEAGFYGGHGIVGAQVPLGCGMAFAQKYSKEEHVTFTLYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKNPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRSRDEISGVRQERDPIERVRKLLLAHDIASEKELKDIEKEIRKEVDEAIAKAKESPMPDPSELFANVYVKGLGAESFGADRKELRATLP* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1355 394 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 11 394 - -
Aev05g1355 394 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 62 374 IPR017597 GO:0004739|GO:0006086|GO:0043231
Aev05g1355 394 CDD TPP_E1_PDC_ADC_BCADC 67 357 - -
Aev05g1355 394 Gene3D - 20 387 - -
Aev05g1355 394 MobiDBLite consensus disorder prediction 297 316 - -
Aev05g1355 394 Coils Coil 336 356 - -
Aev05g1355 394 Pfam Dehydrogenase E1 component 70 365 IPR001017 GO:0016624
Aev05g1355 394 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 11 394 - -
Aev05g1355 394 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 52 375 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1355 Aev-Chr5 9717400 9722674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1355 1 394 Acyl Lipid Metabolism Gene Families AT1G24180 79.545 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1355 K00161 - tcc:18609342 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1355 05 9717400 9722674 Aev05g1355 05 9717400 9722674 ECH