Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1352 ATGATACCTAAAATGAGACCCCATTTTCACTTTCTTCCCATACTATTTTTCTTCACCCTATTTTGGGCTCAAATTAGACCTGACCCAGACCCACTTCAAGATTATTGTGTTGCAGATAACAAAAACTCATTTTTCATCAATGGGGTTCCTTGCATTAACCCAAAAGAAGTTTCATCATTCCATTTTGCAACTTCTGCATTGTCCAAACCAGGTAACACTAGCAACAAATTTGGCTTTGCTGTGACCCCAACAAATACTCTTAATCTTCCTGGGCTTAACACATTGGGCCTAATCTTGGCCCGGGTAGACATAGAGGGTAACCAACTTGTGCCACCTCACTCACATCCACGGGCCTCAGAAGTCACAACTTGTCTCAAGGGCCAACTCCTTGTGGGCTTTGTGGACACAAGTAACCGAGTCTTTACACAGAATTTAAAGCCCGGTGAGTCATTTGTGTTCCCTAAAGGGCTTATTCATTTTCTTTACAATTTGGACTCTAAGGAACCAGTGGTGGCATTGTCTGGTCTCAATAGCCAAAACCCAGGTGCACAATTAGCACCAGTTGCAACATTTGCTAGCAAGCCCTCAATTCCTGTTGAAATTCTTTCCAAGGCCTTCCAAATTAGCCCCCAAGAAGTCGAAATTATTCGCAAAAAACTCGGAGGGTAA 669 0.429 MIPKMRPHFHFLPILFFFTLFWAQIRPDPDPLQDYCVADNKNSFFINGVPCINPKEVSSFHFATSALSKPGNTSNKFGFAVTPTNTLNLPGLNTLGLILARVDIEGNQLVPPHSHPRASEVTTCLKGQLLVGFVDTSNRVFTQNLKPGESFVFPKGLIHFLYNLDSKEPVVALSGLNSQNPGAQLAPVATFASKPSIPVEILSKAFQISPQEVEIIRKKLGG* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1352 222 PRINTS Germin signature 143 163 IPR001929 GO:0030145
Aev05g1352 222 PRINTS Germin signature 113 133 IPR001929 GO:0030145
Aev05g1352 222 PRINTS Germin signature 177 192 IPR001929 GO:0030145
Aev05g1352 222 CDD cupin_OxOx 28 220 - -
Aev05g1352 222 SUPERFAMILY RmlC-like cupins 56 220 IPR011051 -
Aev05g1352 222 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 1 13 221 - -
Aev05g1352 222 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 13 221 - -
Aev05g1352 222 SMART Cupin_1_3 65 214 IPR006045 -
Aev05g1352 222 Gene3D Jelly Rolls 27 222 IPR014710 -
Aev05g1352 222 Pfam Cupin 67 213 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1352 Aev-Chr5 9686100 9686768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1352 28 221 Miscellaneous Gene Families AT5G39130 43.939 1.84e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1352 - - lja:Lj2g3v1365980.1 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1352 05 9686100 9686768 Aev05g1352 05 9686100 9686768 ECH