Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1348 ATGGAGTGCGCAGCGAAGGGCAGCGGAACACGGTGCACCGGCGCCGCCACAAGACTCTGCGCTCGTTGCGGAGCCGTTGCTTATTGCTCTCTCTCTCACCAGATTGCTCACTGGAGTATCCACAAACACGAATGTGATAGGTTAGAGCAACAGATGAACAGTGTTCATGTCCTTAATGATTTTCCTTTTACTTTCTCTCGCGAAGTTACATTTCAGGTTTGTGTGAAGCAGGAAACTAGGTGTTCATTCTTGAGCAAAAGGGGCCTTCATCAAATAGGGATGTGGATGCATGAATGCAGTTGTGGATCATCATCTGCTTCATTCGATTGTTTAAGGTTGAATGATGGTTGGGATCTCCCAAGCAATTTGTGTCCATGTTGTGGACCTGAATCTGCAATATCTCAAAATTTATGTAGTTGGAGTGACTACTATAAATGGAGGTGCATCCCGTTAGATTCACCTGTTGCTTTGATTCTTCAATGGCCCCTTACAATATATCATGCTGCTCAATTAGTTGGAATCAGTACCTTTAACTCTGAAGTCGGTGATAAGTTGTGCATACATTACCTCGGACCTGAGAAAGAGCTGCTACAACTTGCTGCATTTGGAGAACTACAAGCTCTCTTCCCTGGTGTACATATTCAGATAGAATTTATTGGACCTGCAATTCCTCCACAAAGGGATGGTGAGAAGATCAGCATTTCTAAGTATGCTTGTTGCAATGAAGATCAGTGTGTATGCAAATCAGTGAGTGAAAGTGACAATTTAGGAATCCAATCTGGTACTACTTCGGCAGTGACGTTGCAGCTGTGGCGAGGATTCTATCATGACCGATATAGAGATATAGTTAAGGAGGATTCCTACCCTCATCTAGTGATTGCTCCAAATGGTGGCATTGCTGCATATCCCAGTTGGTTACCTACTATTGAGTTAATTGAAAAGATTGATGTCCCAACCATATTTACTGATTATTGTGAGGAAGCTTGTCATCTTGCTGCAAGTTGCATCAACTCTGTAATTGGACGCTCTCTTAAACACCCTGTTCAGTTAAATCCTTTCAGGCAACCTATTGTAGTGGAAGATAGTGTGCTGCTGCTTCCTTGCTACTCAAATTGCTTTCTTTTTGGGTTGTAA 1134 0.4295 MECAAKGSGTRCTGAATRLCARCGAVAYCSLSHQIAHWSIHKHECDRLEQQMNSVHVLNDFPFTFSREVTFQVCVKQETRCSFLSKRGLHQIGMWMHECSCGSSSASFDCLRLNDGWDLPSNLCPCCGPESAISQNLCSWSDYYKWRCIPLDSPVALILQWPLTIYHAAQLVGISTFNSEVGDKLCIHYLGPEKELLQLAAFGELQALFPGVHIQIEFIGPAIPPQRDGEKISISKYACCNEDQCVCKSVSESDNLGIQSGTTSAVTLQLWRGFYHDRYRDIVKEDSYPHLVIAPNGGIAAYPSWLPTIELIEKIDVPTIFTDYCEEACHLAASCINSVIGRSLKHPVQLNPFRQPIVVEDSVLLLPCYSNCFLFGL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1348 377 Pfam MYND finger 12 45 IPR002893 -
Aev05g1348 377 ProSiteProfiles Zinc finger MYND-type profile. 1 45 IPR002893 -
Aev05g1348 377 PANTHER ZINC ION BINDING PROTEIN 1 377 - -
Aev05g1348 377 Pfam MSS51 C-terminal domain 162 360 IPR046824 -
Aev05g1348 377 SUPERFAMILY HIT/MYND zinc finger-like 11 51 - -
Aev05g1348 377 PANTHER ZINC ION BINDING PROTEIN 1 377 - -
Aev05g1348 377 Gene3D - 2 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1348 Aev-Chr5 9645641 9649122 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1348 K24081 - gmx:100808017 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1348 05 9645641 9649122 Aev05g1348 05 9645641 9649122 ECH