Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1335 ATGAAACTTCTCCAATGTTCCCCATGTTGCAACTCACACAATCATCATCATCACCACCACCAACAAGAATCATCATCACAACCTCACCACCTCAATTCAGAATCATCATCACATTCTTCATCCCTCTCTTCACAACCAAGCCTTCCCTCTGTTCCTTCCCTCACACCACAACAATCCCACAACAACCACCCTGAACCGCCACAACTTACCGCACACCATGAATTCATAACCGCCATAAAGGGCCACACTTCCCCCATCTTCTCCCTCGCTCTCCATGGAAAATCCCTCTACAGTGGCTCCTCCAACAGCGAGATCAGGACATGTAAAAAAGACCCTTTTGCCCTTCAACCCCCAAACAACAAAAACACCACCACTCTGGTTGCAATCAGCAATGGAGCCGTGAAGTCCATGATCGTTTCCAATGATGGTAATAAGCTTTTCACCGCTCATCAAGATCACAAAATCCGCGTTTGGAGAGTAATCGAAGAAGAACCCAAAAAGAGTGACCAAATCGAAAAACAGAGGAACTGTTACTACAAATGCATAGCGACTCTTCCAACTTTCCAAGACCGATTCACGAAGCTATTCTCATCGAAGAACTACGTTGAGGTTCGGAGGCACAAGAAGTGCACGTGGGTGCATCACGTGGACACAGTTTCTGCTCTCGCTCTATCCTACGATGGTGCTCTGCTTTACTCTGTTTCTTGGGACAGAACATTCAAAATCTGGAGAACCTCTGATTTCAAGTGCTTGGAATCAGTTAACGCTCACGAGGATGCAATTAACGCAATAGCTCTGTCACGTGAGGGGATTGTGTATACTGGGTCAGCGGATAAGAAGATAAAGGTGTGGAAGAAGTTTGAGGGAGAGAAAAAGCATAGATTTTTGGGGACATTGGAGAAGCACAAATCTGCTGTGAATGCTCTGGCGCTTAGTGAAGATGGGTCTGTGTTGTATTCTGGTGCTTGTGACAGGTCAATTTTGGTGTGGGAGAAAAAAGAAAGAGAAGAAGAAGGAAATGATGATGGTGTTATGGTGTTGGTTGGTGCTTTAAGAGGGCACACGAAGGCGATTTTGTGTTTGGTTGTGGTGTCGGATTTGGTGTTTAGTGGTTCTGCGGATAATAGTGTTAGGATTTGGAGGAGATATGATGATGATGAGAGGAAGAGGTGTTATTCGTGTTTGGCTGTGTTGGAAGGACATAGAAGGCCCGTCAAGTGTTTGGCTGTGGCTGTTGACTCCAACGGTGGTGGTGGTGGTGGTGGCGGCGGCGACGGCGGCGGTGGTGGTGGTGATGGTAATAGGAGCAGTTCTTATGTGGTTTACAGTGGATATGATGATATTAATGAATTTTTGAAATCAAAGTGA 1368 0.4598 MKLLQCSPCCNSHNHHHHHHQQESSSQPHHLNSESSSHSSSLSSQPSLPSVPSLTPQQSHNNHPEPPQLTAHHEFITAIKGHTSPIFSLALHGKSLYSGSSNSEIRTCKKDPFALQPPNNKNTTTLVAISNGAVKSMIVSNDGNKLFTAHQDHKIRVWRVIEEEPKKSDQIEKQRNCYYKCIATLPTFQDRFTKLFSSKNYVEVRRHKKCTWVHHVDTVSALALSYDGALLYSVSWDRTFKIWRTSDFKCLESVNAHEDAINAIALSREGIVYTGSADKKIKVWKKFEGEKKHRFLGTLEKHKSAVNALALSEDGSVLYSGACDRSILVWEKKEREEEGNDDGVMVLVGALRGHTKAILCLVVVSDLVFSGSADNSVRIWRRYDDDERKRCYSCLAVLEGHRRPVKCLAVAVDSNGGGGGGGGGDGGGGGGDGNRSSSYVVYSGYDDINEFLKSK* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1335 455 Gene3D - 9 199 IPR015943 GO:0005515
Aev05g1335 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 351 380 IPR001680 GO:0005515
Aev05g1335 455 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 299 331 - -
Aev05g1335 455 MobiDBLite consensus disorder prediction 26 66 - -
Aev05g1335 455 Pfam WD domain, G-beta repeat 134 158 IPR001680 GO:0005515
Aev05g1335 455 Pfam WD domain, G-beta repeat 249 285 IPR001680 GO:0005515
Aev05g1335 455 Pfam WD domain, G-beta repeat 296 330 IPR001680 GO:0005515
Aev05g1335 455 Pfam WD domain, G-beta repeat 213 243 IPR001680 GO:0005515
Aev05g1335 455 Pfam WD domain, G-beta repeat 348 380 IPR001680 GO:0005515
Aev05g1335 455 MobiDBLite consensus disorder prediction 12 68 - -
Aev05g1335 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 254 285 IPR001680 GO:0005515
Aev05g1335 455 CDD WD40 131 415 - -
Aev05g1335 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 299 340 IPR001680 GO:0005515
Aev05g1335 455 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 351 380 - -
Aev05g1335 455 Gene3D - 343 447 IPR015943 GO:0005515
Aev05g1335 455 Gene3D - 200 342 IPR015943 GO:0005515
Aev05g1335 455 SMART WD40_4 205 244 IPR001680 GO:0005515
Aev05g1335 455 SMART WD40_4 391 452 IPR001680 GO:0005515
Aev05g1335 455 SMART WD40_4 247 285 IPR001680 GO:0005515
Aev05g1335 455 SMART WD40_4 119 159 IPR001680 GO:0005515
Aev05g1335 455 SMART WD40_4 72 109 IPR001680 GO:0005515
Aev05g1335 455 SMART WD40_4 344 381 IPR001680 GO:0005515
Aev05g1335 455 SMART WD40_4 292 331 IPR001680 GO:0005515
Aev05g1335 455 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 254 285 - -
Aev05g1335 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 127 168 IPR001680 GO:0005515
Aev05g1335 455 SUPERFAMILY WD40 repeat-like 74 411 IPR036322 GO:0005515
Aev05g1335 455 PANTHER SIMILARITY TO GTP-BINDING REGULATORY PROTEIN AND WD-REPEAT PROTEIN 31 444 - -
Aev05g1335 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 212 253 IPR001680 GO:0005515
Aev05g1335 455 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 31 444 IPR045182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1335 Aev-Chr5 9546465 9548480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1335 134 381 Acyl Lipid Metabolism Gene Families AT3G18860 26.996 3.06e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1335 - - gmx:100784166 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1335 05 9546465 9548480 Aev05g1335 05 9546465 9548480 ECH