Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1295 ATGCTATGCTCTCTAATCCGTTTCCGCCGTTACGCTACTAGCTCCTCAACTCTCTACTCCTCCTCACTCTCTCTCCTCCTCCGCCGTAACCGTTTCTTCTCCTCCGCCGTGACCGCCGCCATGGCTAAGCAGCATCCTAAGGACCAGGCCTACCTCGACGGCGTCATCCCTAAGCGCATCACCATGTTCGAGGCGATCCAGTTGGAGCAGAGAACACATCGTCTCTCCCTCGCGCCGGATCCGATCAAGGTCACACTCCCCGACGGCACAGTCAAGAGTGCCGCTAAGTGGCGAACAACTCCTTTCGACGTAGCTAAAGAGATTTCGAAGAACCTCGCAAACAACGCGCTCATCTCGAGGGTCAATGGCGTTCTATGGGACATGAATAGGCCTCTCGAGGAGGATTGCGAGCTCAGGATCTACAAGTTCGAGGACGATGAAGGACGCGACACGTTCTGGCACTCTAGCGCTCACATTCTCGGCCAGTCGCTTGAGATGGAGTATGGATGCAAGCTATGCATTGGACCCTGCACTACAAGAGGAGAGGGGTTCTATTATGATGCATTTTATGGTGAATTGGGTTTGAACGAAGATCACTTTAAGCTAATTGAGGCTGGGGCATCGAAGGCTGTTGCGGAAAGACAACCCTTTGAGCGCATCGAAGTAACACGTGATCAGGCACTTGAGATGTTTTCGGATAATCAGTTTAAGGTTGAAATTATAAAGGATTTGCCTGCTGACAAGACTATCACAGTATATAGATGTGGTCCCCTGGTTGATTTGTGTCGAGGACCACATATACCTAATACTGCCTTTGTCAAAGCAATTGCATGTCTAAAGGCCTCATCAGCGTATTGGAGGGGGGACAAAGATCGGGAAAGTTTGCAGAGAGTCTATGGCATATCTTATCCTGATCAGAAGAGCTTAAAGGAATATTTGCTTAGGTTGGAGGAGGCTAAAAAGTACGATCACCGGATTTTGGGTGTGAAACAGGAGCTTCTTCTTCACCATGAATGGAGTCCAGGAAGCTGGTTTTTTCTTCCACATGGTGCACGGATCTACAACAAATTGATGGAGTTTATTCGAAATCAGTACAGAGACAGGGGCTATCAAGAGGTCATATCTCCAAATGTATTTAACATGGATCTGTGGGTGCAATCTGGTCACGCTGCAAATTATAGAGAGGATATGTTTATTTTGGAGATTGAAAAACAAGAGTTTGGGCTGAAACCAATGAATTGCCCTGGGCACTGCTTGGTCTTTAAACACAGAGTTCGCTCGTATAGAGAACTTCCGCTTCGTATGGCTGATTTTGGGGTTTTGCATAGGAATGAGGCTAGTGGTGCTTTGAGTGGATTGACACGTGTTAGGAGATTTCAGCAGGATGATGCACATATTTTCTGCAGGGAGTCCCAGATAAAGGATGAAGTGAGAAGTGCCTTAAATTTCATCAATTACGTCTATGAAATATTTGGTTTCACATATGATCTCAAGCTTTCTACGAGGCCAGAGAAATACCTAGGAGATATTGCAACATGGGACAAGGCTGAAAATGCTCTTAAAGAAGCTTTAGATGAGTTTGGGAAGCCTTGGCAGTTGAATGAAGGAGATGGTGCATTCTATGGACCAAAGATAGATATCAGTGTATCTGATGCCTTGAATAGGAAATTCCAGTGTGCAACTTTGCAGCTTGACTTCCAACTGCCTGATCGCTTTAAGTTGGAATACTCAGCTGAAGATGAAGCCAAAATTGAGAGACCTGTCATGATACACAGAGCCATTTTAGGATCTGTTGAGCGCATGTTTGCCATACTCTTAGAGCACTTCAAGGGTAAATGGCCCTTCTGGCTCAGTCCACGTCAAGCAATTGTATGCCCAGTGTCGGAGAAATCACAAGCTTATGCACTGCAGGTGCGAAATCAAATCCACCAAGCAGGGTTTCATGTTGATGCAGATACAACTGATAGGAAGATTCAAAAGAAGGTGCGAGAGGCTCAATTAGCACAATACAACTACATCTTGGTTGTTGGAGAGGAGGAAGCTAACACGGGACAGGTGAGTGTACGGGTTAGAGATAAGGCAGACCATTCTGTTATGAGTATTGAGAACCTACTCAAACACTTCAGAGACGAAGTTGCAGCCTTCCATTGA 2151 0.4612 MLCSLIRFRRYATSSSTLYSSSLSLLLRRNRFFSSAVTAAMAKQHPKDQAYLDGVIPKRITMFEAIQLEQRTHRLSLAPDPIKVTLPDGTVKSAAKWRTTPFDVAKEISKNLANNALISRVNGVLWDMNRPLEEDCELRIYKFEDDEGRDTFWHSSAHILGQSLEMEYGCKLCIGPCTTRGEGFYYDAFYGELGLNEDHFKLIEAGASKAVAERQPFERIEVTRDQALEMFSDNQFKVEIIKDLPADKTITVYRCGPLVDLCRGPHIPNTAFVKAIACLKASSAYWRGDKDRESLQRVYGISYPDQKSLKEYLLRLEEAKKYDHRILGVKQELLLHHEWSPGSWFFLPHGARIYNKLMEFIRNQYRDRGYQEVISPNVFNMDLWVQSGHAANYREDMFILEIEKQEFGLKPMNCPGHCLVFKHRVRSYRELPLRMADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQIKDEVRSALNFINYVYEIFGFTYDLKLSTRPEKYLGDIATWDKAENALKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALNRKFQCATLQLDFQLPDRFKLEYSAEDEAKIERPVMIHRAILGSVERMFAILLEHFKGKWPFWLSPRQAIVCPVSEKSQAYALQVRNQIHQAGFHVDADTTDRKIQKKVREAQLAQYNYILVVGEEEANTGQVSVRVRDKADHSVMSIENLLKHFRDEVAAFH* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1295 716 ProSiteProfiles TGS domain profile. 80 142 IPR004095 -
Aev05g1295 716 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 250 299 IPR012947 GO:0004812|GO:0005524|GO:0043039
Aev05g1295 716 SMART tRNA_SAD_4 250 299 IPR012947 GO:0004812|GO:0005524|GO:0043039
Aev05g1295 716 TIGRFAM thrS: threonine--tRNA ligase 153 711 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Aev05g1295 716 Gene3D - 145 302 - -
Aev05g1295 716 CDD ThrRS_core 323 619 IPR033728 -
Aev05g1295 716 Hamap Threonine--tRNA ligase [thrS]. 147 714 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Aev05g1295 716 PANTHER THREONINE--TRNA LIGASE, CYTOPLASMIC 41 715 - -
Aev05g1295 716 SUPERFAMILY Class II aaRS ABD-related 607 712 - -
Aev05g1295 716 Gene3D - 80 140 IPR012675 -
Aev05g1295 716 PANTHER THREONINE-TRNA LIGASE 41 715 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Aev05g1295 716 SUPERFAMILY TGS-like 82 142 IPR012676 -
Aev05g1295 716 CDD ThrRS_anticodon 619 709 - -
Aev05g1295 716 CDD TGS_ThrRS 82 147 - -
Aev05g1295 716 Gene3D Bira Bifunctional Protein; Domain 2 303 611 IPR045864 -
Aev05g1295 716 SUPERFAMILY ThrRS/AlaRS common domain 144 321 IPR018163 GO:0000166
Aev05g1295 716 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 348 614 IPR006195 -
Aev05g1295 716 SUPERFAMILY Class II aaRS and biotin synthetases 323 606 IPR045864 -
Aev05g1295 716 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 403 608 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Aev05g1295 716 Gene3D - 612 715 IPR036621 -
Aev05g1295 716 Pfam TGS domain 82 142 IPR004095 -
Aev05g1295 716 PRINTS Threonyl-tRNA synthetase signature 409 437 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Aev05g1295 716 PRINTS Threonyl-tRNA synthetase signature 614 626 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Aev05g1295 716 PRINTS Threonyl-tRNA synthetase signature 543 571 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Aev05g1295 716 PRINTS Threonyl-tRNA synthetase signature 587 600 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Aev05g1295 716 PRINTS Threonyl-tRNA synthetase signature 442 465 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Aev05g1295 716 Pfam Anticodon binding domain 621 710 IPR004154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1295 Aev-Chr5 9154114 9162094 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1295 K01868 - gmx:100812652 1284.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1295 05 9154114 9162094 Aev05g1295 05 9154114 9162094 ECH