Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1261 ATGGCGATGGAGAGAACCCAACCCGACGACGACGGTGCTCGTCCATGGCAGTCCTACCACACTGTTTACACAACCGCCAAAGCAGGAATGGATGGGGTTGACAAGGAGAAGGTGCAAAGGATAGTGTATGAAATGAGCAAAGGATCAAAGTATTTTCAGAACGAGGAGCGCAAGGACGCTTTTATTAAGCACAAGATCGATAACCTCCGAACTCAGTGTGTTAAGCTTACACAATCAGACTTATCCCATTACCAGAAGGTGGCTGATAAAAGAATCCTTGAGGTAGAAGCTTCACGGGATCTTTCAAGGATTTGGTTACATGTAGATATGGATGCTTTCTATGCTGCAGTTGAGACTTTAAGTAACCCTACATTAAATGGCAAGCCAATGGCTGTTGGTAGCATGTCGATGATATCCACTGCCAATTATGAGGCTAGGAAATTTGGGATTCGTGCTGCCATGCCTGGGTTCATTGCACGCAAACTTTGTCCAGAATTGATATTTGTCCCTACAGATTTCAAGAAGTATACTTATTACAGTGATTTGACCAGACAAGTTTTTCGGAGGTTTGATCCCAATTTCATGGCTGCTAGCCTCGATGAAGCGTACCTAGATATAACTGAAGTTTGCAAAGAAAGGAATGCCAAAAGTGAAGAAATTGCCGAAGAACTCAGAGCTAGTGTTTATGAAGAGACTGGTCTCACATGTAGTGCTGGAGTGGCACCAAATCGCTTACTTGCTAAGGTTTGCTCAGATATTAACAAGCCAAATGGACAGTATGTTTTACCGAATGACCGCATGGCTGTTATGACTTTCATATCCTCCCTTCCTATCAGAAAGATTGGTGGAATTGGTAAGGTCACTGAACATATTTTGAAGGGTGTTTTTGGAATTAACACATGTGAGCAGATGCTGGAAAAGGCTAGCTACCTCTCTGCTCTTTTTTCTCAGTCGACAGCAGATTTTTTTCTCTCTGTGGGTTTAGGTCTTGGGAGGACAGATTGCCCCCAAGAAAGATTTCGGAAAAGTATCAGTAATGAAAGAACATTTTCTGCCACCGAGGATGAAGTGCTGTTGTATAAAAGATTGGCGGAGCTTGCCGAAATGCTATCCACAGACATGCAAAAAGAAGGTCTGCGTGGGCGAACATTGACTCTTAAACTGAAAACTTCTTCCTTTGAGGTGCGGACTAGAGCTGTGACTTTAGGGAAGTACATCAGCTCGAGTGAGGATATCTTGAAGCATGCTTCAAAGCTGCTAAAAGCTGAACTTCCGATTTCAATAAGATTAATAGGCCTTAGAGTATCACACTTTGATGGAGACAAGTATGGTGGTGCTACATCTGATCCAAAACAGAAGACCATTACCAACTTCATTACGTCAGTAGATGCCAATAGGAACTGTTCTTTTCCAGATGTTGCAGATCTTGACTTGGCCAGTGATACAGAAACTGATCTTTCCATTGACGGTCGGCAGACATGTCACGATGATTGCGGAGACTCTTTTGCTGGGAATCAGTCATTAGATGTAGATTACCAAAGTTGCACTGTCAAGAAAAGTGATGGTTCAGACGAGGTGCACGCGTCTGTCAACGATGCTTCTTGTTCGAATTATATTGGAGTTGAAGCCATGGGATCAGCTGTTTTGGAGGGCACTGATATTCGTACTAATGCGCCTAGTCTCTTGGAGGATGAGCGATTTAACTCATGTCAGGAAGCAATAATGTTGTGGTTGAATGACTACAAATGCTCACTCTGTGGAATAGAACTGCCTCCTAGTTTTGTTGAGGAAAGATTAGAGCACTCTGATTTTCATCTTGCCGAAAAGCTTCAAAACGAAGAATCTAGGATTCACCAAACAACACTTGTTCCGAGTCAAAGTCGAGATCAGAAGGATCGAATCGTTAGACAAAGCAAATCCAAGAAGCAGAAGCTGTCCCACAAACAAGGCAATTATAGACCCATTGATTATTTTTTTGTTAGAGAGTAA 1989 0.4268 MAMERTQPDDDGARPWQSYHTVYTTAKAGMDGVDKEKVQRIVYEMSKGSKYFQNEERKDAFIKHKIDNLRTQCVKLTQSDLSHYQKVADKRILEVEASRDLSRIWLHVDMDAFYAAVETLSNPTLNGKPMAVGSMSMISTANYEARKFGIRAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRQVFRRFDPNFMAASLDEAYLDITEVCKERNAKSEEIAEELRASVYEETGLTCSAGVAPNRLLAKVCSDINKPNGQYVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILKGVFGINTCEQMLEKASYLSALFSQSTADFFLSVGLGLGRTDCPQERFRKSISNERTFSATEDEVLLYKRLAELAEMLSTDMQKEGLRGRTLTLKLKTSSFEVRTRAVTLGKYISSSEDILKHASKLLKAELPISIRLIGLRVSHFDGDKYGGATSDPKQKTITNFITSVDANRNCSFPDVADLDLASDTETDLSIDGRQTCHDDCGDSFAGNQSLDVDYQSCTVKKSDGSDEVHASVNDASCSNYIGVEAMGSAVLEGTDIRTNAPSLLEDERFNSCQEAIMLWLNDYKCSLCGIELPPSFVEERLEHSDFHLAEKLQNEESRIHQTTLVPSQSRDQKDRIVRQSKSKKQKLSHKQGNYRPIDYFFVRE* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1261 662 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 339 437 IPR036775 GO:0003684|GO:0006281
Aev05g1261 662 PANTHER DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER 9 641 - -
Aev05g1261 662 Pfam IMS family HHH motif 268 298 IPR024728 -
Aev05g1261 662 Gene3D - 110 260 IPR043128 -
Aev05g1261 662 MobiDBLite consensus disorder prediction 621 648 - -
Aev05g1261 662 Pfam Ubiquitin-Binding Zinc Finger 580 613 IPR041298 -
Aev05g1261 662 Gene3D - 122 170 - -
Aev05g1261 662 PANTHER DNA POLYMERASE KAPPA 9 641 - -
Aev05g1261 662 Pfam impB/mucB/samB family C-terminal domain 341 441 IPR017961 GO:0003684|GO:0006281
Aev05g1261 662 Gene3D - 23 109 - -
Aev05g1261 662 ProSiteProfiles UmuC domain profile. 105 285 IPR001126 GO:0006281
Aev05g1261 662 CDD PolY_Pol_IV_kappa 106 438 IPR022880 GO:0003887
Aev05g1261 662 Gene3D - 261 334 - -
Aev05g1261 662 ProSiteProfiles Zinc finger UBZ3-type profile. 576 613 IPR041298 -
Aev05g1261 662 SUPERFAMILY DNA/RNA polymerases 79 333 IPR043502 -
Aev05g1261 662 PIRSF DNA_pol_eta 215 430 - -
Aev05g1261 662 PIRSF DNA_pol_eta 445 662 - -
Aev05g1261 662 PIRSF DNA_pol_eta 97 220 - -
Aev05g1261 662 Pfam impB/mucB/samB family 108 252 IPR001126 GO:0006281
Aev05g1261 662 Gene3D - 338 443 IPR036775 GO:0003684|GO:0006281
Aev05g1261 662 Hamap DNA polymerase IV [dinB]. 102 478 IPR022880 GO:0003887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1261 Aev-Chr5 8872873 8877440 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1261 K03511 - gmx:100816973 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1261 05 8872873 8877440 Aev05g1261 05 8872873 8877440 ECH