Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1053 ATGTCAGTTGCTGATGTTGCTTTGGGTCCGATTCACAAGGGTTCGGCAAATTTCCAAGACCAGCTTGGATCTCTCTCTGATGAATCCATACTGATATATCTCACCGTGGATGGAGTGGTGACCCCAATGCGTGTGTTGGAGTCAGACTCCATTGCCTCGGTGAGGCTGAGGATTCAGACATGCACAGGGTTCTCATCAGGGAACAGGAAGCACAAGCTGGTCTCCAATGGCAGAGAGCTTGCCCGCAACGATTCGCTCATCAGGGACTACGGTGTGACTTCAGGGGATGTGGTTCACCTAGTTCTGCGTCTCACCGATCTCATCTTCATCGTTGTGAGGACCACATGTGGGAAGGAATTCGAGTTCCGGATTGATAGGCATAGGAATGTGGGGTACCTCAAGCAGAGGATTGAGAAGAAGGGGAAAGGTTTTATCGATCAAGAGCTCTTCTGGGACGACGAAAAGCTTGAGGATCAGAGGCTCTTCCATGACATATGCAAGAGTGATGATGATGTGATTCATTTGATAATCAAGAAATCAGAAGCGGATGTGAAGGCCACACCAATTCACAAGGACTTGGAGCTTTCTGTTGTGGCAGCTGCCGAAAGCGAGGAAGAGGATCAGGTGGAAGAGATTCCATCATCAGGGCTTGATTTCTGGTTGGAGCCATTTGTTGTGAACCCTAAGATCAATTTTTTTCCTTTCCTTTGGGACATTGTCAACTCCACATTCGATGGTTTGAAAAACGGAAACCGTCCTATCAGGTCATCCGAGGGCACTGGCGGGGCATACTTCATGCAGGATTCAACCGGCATGGAGTATGTCTCGGTCTTTAAGCCCATGGATGAGGAGCCAAATGCTGTGAACAACCCGCAAGGCCTTCCGGTTTCATCTAATGGTGAAGGTTTGAAAATAGGAACAAAGGTGGGAGAGGGAGCCGTGAGAGAAGTTGCGGCATATATATTAGATCATCCAAGGGCTGGGCCACGTTTGGAATCCGGCAAAGCGATAGGCTTTGCCGGAGTTCCCCCTACTGTTATGGTCCAGTGCCTGCATGAGGCATTCAACCACCCAGATGGGTATGATTGCTCATCAGACAATTTCAAAGTGGGGTCATTGCAGATGTTCATGAACAATGATGGCAACTGTGAGGACATTGGACCAGGTGCTTTTTCTGTTGAGCAGGTGCACAAGATTACTGTTCTTGATATCAGGATGGCTAATGCAGATAGGCATGCTGGGAACATCCTCTTCAGGAAACAGCCTGATGGCCAGACTTTGCTCATTCCTATCGATCACGGCTACTGCCTCCCAGAAAAATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCCCAAGCACGCCAGCCTTACACTCCTGATACAATTGATTACATTAACTCTCTTGATGCTGAGAAAGACATTGAACTTCTGAAATACTATGGGTGGGATGTTCCAGTTGAGTGTGCTCGAACACTCCGAATCTCCACAATGTTACTGAAAAAAGGGGTTGATAGAGGCCTCACTCCCTATGACATCGGAAGCATCATGTGCAGGGTGAATATGAACAAGAAATCAGCAATTGAAGAGATCATTTATGAAGCTCAGGAATCATTGCTTCCAGGCATGGGGGAATCTGCATTTCTTGAATCTGTATCCAAGATCATGGATTCCCGGCTTGATAAGCTTTCAAAATAG 1698 0.4729 MSVADVALGPIHKGSANFQDQLGSLSDESILIYLTVDGVVTPMRVLESDSIASVRLRIQTCTGFSSGNRKHKLVSNGRELARNDSLIRDYGVTSGDVVHLVLRLTDLIFIVVRTTCGKEFEFRIDRHRNVGYLKQRIEKKGKGFIDQELFWDDEKLEDQRLFHDICKSDDDVIHLIIKKSEADVKATPIHKDLELSVVAAAESEEEDQVEEIPSSGLDFWLEPFVVNPKINFFPFLWDIVNSTFDGLKNGNRPIRSSEGTGGAYFMQDSTGMEYVSVFKPMDEEPNAVNNPQGLPVSSNGEGLKIGTKVGEGAVREVAAYILDHPRAGPRLESGKAIGFAGVPPTVMVQCLHEAFNHPDGYDCSSDNFKVGSLQMFMNNDGNCEDIGPGAFSVEQVHKITVLDIRMANADRHAGNILFRKQPDGQTLLIPIDHGYCLPEKFEDCTFDWLYWPQARQPYTPDTIDYINSLDAEKDIELLKYYGWDVPVECARTLRISTMLLKKGVDRGLTPYDIGSIMCRVNMNKKSAIEEIIYEAQESLLPGMGESAFLESVSKIMDSRLDKLSK* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1053 565 SUPERFAMILY Protein kinase-like (PK-like) 406 563 IPR011009 -
Aev05g1053 565 SUPERFAMILY Ubiquitin-like 105 179 IPR029071 -
Aev05g1053 565 SMART ubq_7 30 103 IPR000626 GO:0005515
Aev05g1053 565 SMART ubq_7 108 178 IPR000626 GO:0005515
Aev05g1053 565 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 565 IPR044571 -
Aev05g1053 565 CDD Ubl_ubiquitin_like 110 176 - -
Aev05g1053 565 Pfam Phosphatidylinositol 3- and 4-kinase 259 512 IPR000403 -
Aev05g1053 565 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 250 547 IPR000403 -
Aev05g1053 565 ProSiteProfiles Ubiquitin domain profile. 108 182 IPR000626 GO:0005515
Aev05g1053 565 ProSiteProfiles Ubiquitin domain profile. 32 103 IPR000626 GO:0005515
Aev05g1053 565 SUPERFAMILY Ubiquitin-like 34 104 IPR029071 -
Aev05g1053 565 Gene3D - 30 107 - -
Aev05g1053 565 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 565 - -
Aev05g1053 565 Pfam Ubiquitin family 36 104 IPR000626 GO:0005515
Aev05g1053 565 Gene3D - 108 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1053 Aev-Chr5 7406056 7408094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1053 1 564 Acyl Lipid Metabolism Gene Families AT5G24240 56.522 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1053 - - gmx:100787492 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1053 05 7406056 7408094 Aev03g3156 03 30058966 30060919 PCT