Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1052 ATGATGATGACGAAGCCTCAGAGAGCGCCACCGTCAGGTAGAACCAACTTCGCTTCGTGTTTGGTGGCGACGCTGTTTCTGATCTTCCTCCTCATCGCAATCTTCCTTGTTTACTTCTTACTCTTCAGGCCACAGGACCCTGAGATCGCCGTCAGCGCCGTCAGATTCCCATCCTTCACCGCCTCAAACGGCACCGTCAATTTCACCTTCTCACAATACGCCTCCGTAACGAACCCTAACCGCGCCACTTTCTCGCACTACGACAGCTCCCTGCAGCTTCTATACTCCGGCAACCAGGTCGGATTCATGTTCATCCCCGCCGGCACCGTCGACGCTCGCCGGACAAAGTACATGGCCGCTACCTTCACCGTCCAGTCTTTCCCCCTGTCGCCGCCGCCGCCTCCGGTGGCTACAATTGAGATGGAGTCGAGGATCTCGATGGCGGGGCGCGTGAGGGTGCTGCACCTCTTCAGCCATCATGTTGAGGCGAAAGCTGATTGCAGAGTCGCAGTCTCCGCCACCGATGGAACCGTCTTAGGTTTTCATTGCTAA 552 0.5688 MMMTKPQRAPPSGRTNFASCLVATLFLIFLLIAIFLVYFLLFRPQDPEIAVSAVRFPSFTASNGTVNFTFSQYASVTNPNRATFSHYDSSLQLLYSGNQVGFMFIPAGTVDARRTKYMAATFTVQSFPLSPPPPPVATIEMESRISMAGRVRVLHLFSHHVEAKADCRVAVSATDGTVLGFHC* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1052 183 SUPERFAMILY LEA14-like 27 127 - -
Aev05g1052 183 Pfam Late embryogenesis abundant protein 75 167 IPR004864 -
Aev05g1052 183 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 7 183 - -
Aev05g1052 183 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1052 Aev-Chr5 7403577 7404128 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1052 - - cam:101495352 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1052 05 7403577 7404128 Aev03g3155 03 30055780 30056691 PCT