Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1048 ATGGCCTCTTCTCGCGTCAGCATCAACATTTCCAACCTCCCTTCCTCTTCTCCTTCTTCTTCCCCTTATTTAAATCCCTCTCCTCCTTTTCGCACCCACAATCCACCCTTTTCTCACTCTTCCTCTGCTTTCTCTTCTTCTATTTCCGCTGCTATCATGCCTCCCAAAACCGTACTTGTTACCGGCGGCGCCGGTTACATCGGCAGCCACACCGTCCTTCAGCTCCTTCTCGGCGGCTTCAGGACCGTTGTAGTTGATAACCTTGACAATTCCTCTGAGGTTGCTATCCACCGGGTGAGGGAGCTCGCCGGTGAATTCGCTAACAACCTCGCCTTTCACCAGATAGACCTTAGAGACAGAGCTGCACTTGAGCAACTTTTTGCTTCCACAAAGTTTGATGCTGTCATACATTTTGCTGGACTAAAAGCAGTAGGTGAAAGTGTGCAGAAACCATTACTCTACTATAACAACAACTTGATTGGGACAATCACTCTGTTAGAAGTAATGGCTGCACATGGATGCAAGAAGCTTGTGTTCTCATCTTCAGCAACTGTATATGGTTGGCCAAAAGAGGTTCCATGCACTGAAGATTTTCCTTTGTCAGCGATGAATCCTTATGGACGAACTAAGCTTACCATTGAAGAAATATGTCGCGATGTCTACCGTGCTGAATCAGATTGGAAAATTATATTGTTGAGATACTTCAACCCAGTTGGTGCACATCCTAGTGGTTACATTGGGGAGGATCCTCGCGGAATTCCAAACAATCTGATGCCATTTGTTCAGCAAGTAGCAGTTGGTAGACGGCCTGCACTGACAGTATTTGGGACTGATTATAATACAGTTGATGGCACTGGGGTTCGGGATTACATTCATGTTGTTGATTTAGCAGATGGGCACATTGCTGCATTGCTTAAACTTGATGAACCTAATATAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTCTTGGAGATGGTCAGAGCTTTTGAAAAGGCCTCTGGAAAGAAAATTCCACTTGTGATGGCTGGCCGGAGACCTGGTGATGCTGAAATTGTTTATGCATCCACAGAGAAAGCAGAAAGAGAACTTAAGTGGAAGGCGAAATACGGCATTGAGGAGATGTGCCGTGACCAATGGAATTGGGCTAGCAAAAACCCTTATGGCTATGGATCTAAGGACTCTAGTGATTAA 1206 0.4544 MASSRVSINISNLPSSSPSSSPYLNPSPPFRTHNPPFSHSSSAFSSSISAAIMPPKTVLVTGGAGYIGSHTVLQLLLGGFRTVVVDNLDNSSEVAIHRVRELAGEFANNLAFHQIDLRDRAALEQLFASTKFDAVIHFAGLKAVGESVQKPLLYYNNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEDFPLSAMNPYGRTKLTIEEICRDVYRAESDWKIILLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGTDYNTVDGTGVRDYIHVVDLADGHIAALLKLDEPNIGCEVYNLGTGKGTSVLEMVRAFEKASGKKIPLVMAGRRPGDAEIVYASTEKAERELKWKAKYGIEEMCRDQWNWASKNPYGYGSKDSSD* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1048 401 Pfam GDP-mannose 4,6 dehydratase 59 382 IPR016040 -
Aev05g1048 401 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 53 398 - -
Aev05g1048 401 MobiDBLite consensus disorder prediction 1 20 - -
Aev05g1048 401 MobiDBLite consensus disorder prediction 1 36 - -
Aev05g1048 401 Gene3D - 246 387 - -
Aev05g1048 401 CDD UDP_G4E_1_SDR_e 57 386 IPR005886 GO:0003978|GO:0006012
Aev05g1048 401 PANTHER UDP-GLUCOSE 4-EPIMERASE 53 398 - -
Aev05g1048 401 TIGRFAM galE: UDP-glucose 4-epimerase GalE 58 392 IPR005886 GO:0003978|GO:0006012
Aev05g1048 401 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 393 IPR036291 -
Aev05g1048 401 Gene3D - 58 327 - -
Aev05g1048 401 PRINTS Nucleotide sugar epimerase signature 84 100 - -
Aev05g1048 401 PRINTS Nucleotide sugar epimerase signature 314 329 - -
Aev05g1048 401 PRINTS Nucleotide sugar epimerase signature 288 303 - -
Aev05g1048 401 PRINTS Nucleotide sugar epimerase signature 353 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1048 Aev-Chr5 7386051 7389672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g1048 17 386 Miscellaneous Gene Families AT4G00110 27.551 5.47e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1048 K01784 - gmx:100792137 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1048 05 7386051 7389672 Aev03g3153 03 30037194 30040257 PCT