Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0961 ATGGCGTTGCAAGAGAAGCTGGACAGGTTCAAAAAGCAGCAAGCAAAGTGTCAGTCAACCCTATCGAGCATCGAAGCATCGAAAGCTGCAAGCCGTAGACCTAATGTTCCTGCAGCTCCAGCACCTGCTGTCAAATTCTCCAATGACACAGAGAGGCTTCAACACATCAACAGTATCCGCAAAGCCCCCGTAGGAGCTCAGATGAAGCGTGTTATTGATCTCCTCTTTGAGACCCGGCAGGCTTTAACATCTGAGCAAATAAATGAAGCATGTTATGTGGATATGAGAGCTAACAAAGATGTTTTTGAAAATATGCGGAAAAACCCCAAAGTGAAATTTGATGGGGAACGATTCTCTTACAAGTCGAAGCATGACCTTAGGGACAAAAATCAGCTGCTTTACCTGATACGCAAGTTTCCAGAAGGCATTGCTGTTATTGACCTAAAGGATTCTTACCCAACCGTGATGGAGGACTTGCAGGCACTGAAAGCTGCAAGGCAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGATATTGCTTATCCTAATGACCCGAGAGTGCCCATTAAGGTGGATGATGACCTAAAACAACTTTTTCGGGGGATCGAATTGCCTCGTGATATGATTGATATAGAGAGGGATCTCCAAAAGAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGGAGTGCAGCGCAAATGGAAGGCATTTCTGCCAAGCCCAAGCCTAAGTCTAAGAAGAATGAAATCAGCAAGAGGACTAAGCTGACGAATGCCCATCTTCCAGAGCTTTTTCAGAAGTTGAACAATTCCTGA 822 0.4501 MALQEKLDRFKKQQAKCQSTLSSIEASKAASRRPNVPAAPAPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQALTSEQINEACYVDMRANKDVFENMRKNPKVKFDGERFSYKSKHDLRDKNQLLYLIRKFPEGIAVIDLKDSYPTVMEDLQALKAARQIWLLSNFDSQEDIAYPNDPRVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISAKPKPKSKKNEISKRTKLTNAHLPELFQKLNNS* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0961 273 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 52 127 IPR003166 GO:0006367
Aev05g0961 273 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 272 IPR016656 GO:0005673|GO:0006367
Aev05g0961 273 MobiDBLite consensus disorder prediction 23 42 - -
Aev05g0961 273 PANTHER BNAA02G21830D PROTEIN 1 272 - -
Aev05g0961 273 MobiDBLite consensus disorder prediction 242 258 - -
Aev05g0961 273 Pfam TFA2 Winged helix domain 2 127 184 IPR040501 -
Aev05g0961 273 Pfam TFIIE beta subunit core domain 66 125 IPR003166 GO:0006367
Aev05g0961 273 MobiDBLite consensus disorder prediction 221 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0961 Aev-Chr5 6775363 6776968 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0961 K03137 - gmx:100802433 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0961 05 6775363 6776968 Aev05g0961 05 6775363 6776968 ECH
Aev05g0961 05 6775363 6776968 Aev03g3045 03 29346721 29348300 PCT