Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0946 ATGTGCCAATTATCATCATCTACTTCTAATTTCTGTGAAAGCAATGAGGGCCAGCAAAATACTACTACCACTATATCCACAACCAAGAAAATACAGGAGCCTGACATGTTCACCCTTTTGATCCCCAAAACCCCAACATTGGAACAAAAGGGCCAACAAAACCCACATAATTGTAAAAACACTCATCTCTCTCTGGCCCTCAACGAAGCCAAATGCATAGCTCAAATATCACTGCCCATGGTGCTAACTGGCCTAGTGCTATACTCTCGCTCTGTTATCTCCATGCTCTTCCTTGGTCGCCTCGGCGAGCTTGCCCTTGCTGGTGGCTCCTTGGCTATTGGGTTTGCCAACATCACGGGCTACTCGATCCTCTCGGGCCTTGCCATGGGTATGGAGCCCATTTGCGGCCAGGCTTTTGGGGCCAAGAGGTTTAAGCTTCTGGGCCTCACGATGCAGAGGACAGTTCTTCTCCTTCTCCTAACTTCATCCTTCATAGCCTTCTTATGGCTCAACATGAAGAAAATATTGATTCTCTGTGGCCAACAGGAAGACATAGCCATAGAAGCTCAATCTTACATACTCTATTCTATTCCTGATCTCGTGGCGCAATCTTTGCTACACCCTCTCAGAATCTACCTCAGAAGCCAATCTATTACTCTGCCTCTGACTTATAGTGCGGTTCTCTCTGTTCTTCTTCACGTCCCTATTAACTATTTCCTTGTCTCGGTGCTTAATCTTGGAGTCAAAGGCATAGCATTAGGCGCTGTTTGGACCAACTTCAACCTCGTGGCCTCGTTGGTTGTCTACATCTGGGCCTCGGGTATTCACAGGAAAACGTGGAACGGTGTTTCCTCTGCATGTTTCAAAGGTTGGAAATCGCTGTTGAATTTGGCCATTCCGAGCTGCGTTTCGGTGTGCCTCGAATGGTGGTGGTACGAAATCATGATTCTGCTCTGCGGGCTTTTGATTAATCCACATGCAACCGTTGCATCAATGGGGGTCTTGATTCAGACCACGGCATTGATATACATTTTCCCATCTTCTTTGAGCTTCGGTGTGTCGACAAGGGTTGGGAATGAGCTAGGTGCTGAGAATCCTCAGAGAGCGAAACTTGCTGCCATAGTGGGACTCTGTTTTAGCTTCGTTTTGGGGTTCTCTGCATTGGCTTTTGCTATTTCGGTGAGGAATGTGTGGGCCACGATGTTCACGCAAGATGCACAGATCATTGCTCTGACTTCGATGGTGCTGCCAATCATTGGGCTTTGCGAGCTCGGAAACTGCCCTCAGACGACGGTTTGTGGGGTTCTGAGGGGAACGGCGAGGCCGAAATTGGGTGCCAATATAAACTTGGGTTGCTTTTACCTTGTGGGAATGCCGATTGCTGTGTGGTTGGGCTTCTTTGCGGGCTTTGACTTCAAAGGGCTGTGGCTTGGGCTTTTGGGGGCCCAGGGGTCGTGTATGGTGACGATGATGTTCGTGTTGGCTCGCACCAATTGGGAAGGTCAAGCCCAAAGGGCAAAGGAGTTAACATCTTCTGATCCTAGTGAAGAAGCACAAGACAAGATGGTCGAGGAAGAAGAAGAAGAAGAAGATGATGAGAAATGTTCTGCAAAAGAATGCTCTGATTCATTAGTTTGA 1638 0.4805 MCQLSSSTSNFCESNEGQQNTTTTISTTKKIQEPDMFTLLIPKTPTLEQKGQQNPHNCKNTHLSLALNEAKCIAQISLPMVLTGLVLYSRSVISMLFLGRLGELALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGAKRFKLLGLTMQRTVLLLLLTSSFIAFLWLNMKKILILCGQQEDIAIEAQSYILYSIPDLVAQSLLHPLRIYLRSQSITLPLTYSAVLSVLLHVPINYFLVSVLNLGVKGIALGAVWTNFNLVASLVVYIWASGIHRKTWNGVSSACFKGWKSLLNLAIPSCVSVCLEWWWYEIMILLCGLLINPHATVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAENPQRAKLAAIVGLCFSFVLGFSALAFAISVRNVWATMFTQDAQIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPIAVWLGFFAGFDFKGLWLGLLGAQGSCMVTMMFVLARTNWEGQAQRAKELTSSDPSEEAQDKMVEEEEEEEDDEKCSAKECSDSLV* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0946 545 Pfam MatE 79 239 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev05g0946 545 Pfam MatE 300 463 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev05g0946 545 TIGRFAM matE: MATE efflux family protein 79 476 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev05g0946 545 MobiDBLite consensus disorder prediction 505 545 - -
Aev05g0946 545 CDD MATE_eukaryotic 69 505 IPR045069 GO:0042910|GO:1990961
Aev05g0946 545 MobiDBLite consensus disorder prediction 1 27 - -
Aev05g0946 545 PANTHER PROTEIN DETOXIFICATION 54 520 - -
Aev05g0946 545 MobiDBLite consensus disorder prediction 519 535 - -
Aev05g0946 545 PANTHER MULTIDRUG RESISTANCE PROTEIN 54 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0946 Aev-Chr5 6672686 6674323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0946 K03327 - gmx:100811560 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0946 05 6672686 6674323 Aev05g0946 05 6672686 6674323 ECH