Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0878 ATGGCTTCACCCTTGCTGCTACTCTGCTTCATGCTCTGCATCTCACACTCCTTCCTCCATTCAGTCTCATCATCACAAACACAGACACTTGTGTTGCCATTAACACATTCAATCTCCAAAGCCCAATTCAACAGTACCCACCACCTCCTTAAGTCAACATCCACGCGCTCCGCCGCACGCTTCCGCCGCCACCACCAGCGCCAAGTGTCCCTGCCACTCTCCCCTGGAAGCGACTACACCCTATCTTTCACCCTGGGCTCAGGCCCGGCCCAGCCCATAACACTCTACATGGACACAGGCAGCGACCTTGTCTGGTTCCCCTGCGCCCCCTTCGAGTGCATACTCTGTGAGGGAAAGCCCAACCCCGGCCCAGCCAGGCCCCCAAACATCACCCGGGCCCACTCCGTCTCTTGCCAATCCCCTGCATGCTCCGCGGCCCACTCCTCCACGTCATCCTCCGACCTCTGCGCAACCGCACGTTGTCCCTTGGACTCAATCGAAACCTCCGATTGCAACAATTTTCAGTGTCCACCATTCTACTACGCTTACGGCGATGGAAGCTTAATTGGAAATCTCTATCGCCACACGCTCTCTATGTCTTCTCTTTCTCTTAAGAACTTCACCTTCGGTTGCGCCCACACCACCCTCGGCGAGCCCACCGGCGTTGCTGGATTCGGCCGCGGATTGCTCTCATTTCCGGCGCAGGTAGCCACCGTCTCTCCCCAACTCGGTAACAGATTCTCTTACTGCTTGGTTTCTCACTCTTTCGACGGTGAGCGAGTTCATCGAACGAGTCCACTCATTCTTGGCCGTAACGGCGGCGAAACCGGTGAGTTTGTGTACACTTCAATGCTTCGGAACCCGAAGCACCCTTACTTCTACTCCGTGGGCCTCGCCGGAATCTCCGTCGGGAAGAAGGAATTCCCGGCGCCGGATATGCTGAGGAGAGTGGACACCACAGGAAGCGGCGGCGTGGTTGTTGATTCCGGCACGACATTTACGATGTTGCCGGCGAGTTTGTATAACTCGGTGGTGGCTGAGTTCGATCGCCGAGTCGGGCGAGTACACAAGCGCGCGAGTGAGGTCGAGGCGAAAACGGGCCTCGGCCCATGTTATTACTTGGATGGTGTAGCGGCCCAGGTGGCGGCCCAAGTGCCGGCGGTGACGTTGCATTTTGTAGGGAATGGTTCGAGTGTGGTGCTGCCTAGGAGGAACTACTTCTACGAGTTTTTGGACGGTAGTGATGGAGCTAGAATGAAGAGGAAAGTGGGGTGCATGATGCTGATGAACGGTGGTGATGAAGCTGAGTTGAGCGGTGGGCCCGGAGCCACACTTGGGAATTACCAGCAGCAAGGTTTTGAGGTCGTTTATGACCTTGAAAAGCAGCGCGTGGGCTTCGCGAGGAGGCAGTGCGCGTTGCTTTGGGATAGCCTCAACCGTGAGAAGCACTAG 1452 0.5668 MASPLLLLCFMLCISHSFLHSVSSSQTQTLVLPLTHSISKAQFNSTHHLLKSTSTRSAARFRRHHQRQVSLPLSPGSDYTLSFTLGSGPAQPITLYMDTGSDLVWFPCAPFECILCEGKPNPGPARPPNITRAHSVSCQSPACSAAHSSTSSSDLCATARCPLDSIETSDCNNFQCPPFYYAYGDGSLIGNLYRHTLSMSSLSLKNFTFGCAHTTLGEPTGVAGFGRGLLSFPAQVATVSPQLGNRFSYCLVSHSFDGERVHRTSPLILGRNGGETGEFVYTSMLRNPKHPYFYSVGLAGISVGKKEFPAPDMLRRVDTTGSGGVVVDSGTTFTMLPASLYNSVVAEFDRRVGRVHKRASEVEAKTGLGPCYYLDGVAAQVAAQVPAVTLHFVGNGSSVVLPRRNYFYEFLDGSDGARMKRKVGCMMLMNGGDEAELSGGPGATLGNYQQQGFEVVYDLEKQRVGFARRQCALLWDSLNREKH* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0878 483 ProSiteProfiles Peptidase family A1 domain profile. 79 467 IPR033121 -
Aev05g0878 483 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 325 336 IPR001969 GO:0004190|GO:0006508
Aev05g0878 483 Gene3D Acid Proteases 56 261 IPR021109 -
Aev05g0878 483 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 4 480 - -
Aev05g0878 483 Pfam Xylanase inhibitor N-terminal 79 254 IPR032861 -
Aev05g0878 483 PANTHER ASPARTYL PROTEASES 4 480 IPR001461 GO:0004190|GO:0006508
Aev05g0878 483 Pfam Xylanase inhibitor C-terminal 294 467 IPR032799 -
Aev05g0878 483 CDD pepsin_A_like_plant 79 471 IPR034161 -
Aev05g0878 483 Gene3D Acid Proteases 271 475 IPR021109 -
Aev05g0878 483 SUPERFAMILY Acid proteases 74 476 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0878 Aev-Chr5 6159724 6161175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0878 57 474 Miscellaneous Gene Families AT1G77480 24.944 2.53e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0878 - - adu:107488223 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0878 05 6159724 6161175 Aev05g0878 05 6159724 6161175 ECH