Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0846 ATGTCTAGCGGTTCTTCCAAACGGTGGCTTCCTCTCGAAGCTAACCCTGACGTCATGAATCAGTTCCTGAAGGGGCTTGGGCTTCCAGGCGATGAGGCTGAATGCTGTGATGTCTACGGCTTAGACGATGAGCTTCTCGATATGGTTCCTCAGCCTGTTCTTGCTGTCCTCTTTCTCTATCCCATTACCAATCAGACTGAAGAAGAGAGGTTGCAGCAGAACAATGAAGAAAGGGAATATAGCAGTAAAGTTTATTTTATGAAGCAAACTGTGGGTAATGCTTGTGGTACAGTAGGACTGCTTCATGCTCTTGGAAACAACACTTCTGAGGTTAAGCTTGCTGAGGGGTCATTCTTTCATAAGTTCTTTCAGTCCACTGCAAGCATGGACCCGATGCAGCGCGCAGCATTTCTTGAGAATGATGGAGAAATGGAAGTTGCTCATTCAGTTGCTGCAAATGCTGGCGATACAGAGGCATCCGATAATGCATATGCACATTTCATCTGCTTTGCTTGTGTGGATGGTGAACTTTATGAGCTTGATGGAAGAAAGTCAGCGCCAATATCTCATGGTCCATCTTCGCCAAGTACTTTGTTGAGGGATTCAGCTAAAGTGATACAGAGCATGATCCAGAAAAATCCAGACTCCATCAACTTCAATGTCATTGCCTTATCAAAGAAATCCAAGGACGGATGTTAA 699 0.4492 MSSGSSKRWLPLEANPDVMNQFLKGLGLPGDEAECCDVYGLDDELLDMVPQPVLAVLFLYPITNQTEEERLQQNNEEREYSSKVYFMKQTVGNACGTVGLLHALGNNTSEVKLAEGSFFHKFFQSTASMDPMQRAAFLENDGEMEVAHSVAANAGDTEASDNAYAHFICFACVDGELYELDGRKSAPISHGPSSPSTLLRDSAKVIQSMIQKNPDSINFNVIALSKKSKDGC* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0846 232 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 9 210 IPR001578 GO:0004843|GO:0006511
Aev05g0846 232 CDD Peptidase_C12_UCH_L1_L3 9 224 - -
Aev05g0846 232 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 230 IPR001578 GO:0004843|GO:0006511
Aev05g0846 232 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 230 - -
Aev05g0846 232 Gene3D - 3 227 IPR036959 GO:0004843|GO:0006511
Aev05g0846 232 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 177 187 IPR001578 GO:0004843|GO:0006511
Aev05g0846 232 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 11 28 IPR001578 GO:0004843|GO:0006511
Aev05g0846 232 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 161 172 IPR001578 GO:0004843|GO:0006511
Aev05g0846 232 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 89 106 IPR001578 GO:0004843|GO:0006511
Aev05g0846 232 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 49 61 IPR001578 GO:0004843|GO:0006511
Aev05g0846 232 SUPERFAMILY Cysteine proteinases 7 226 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0846 Aev-Chr5 5922007 5923864 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0846 K05609 - gmx:100527718 389.808