Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0826 ATGGGGTGTTTCTACTCTTCACCAAGAAGAAGAAAAGTTGCTGGTGAGGAAGATCCAATATCTCTTTCATCACAGACAGTATTCAGTATCAGTGAAGTTGAAGCACTCTTTGAGCTTTTTAAGGGCATCAGTAGGTCTGTTGTTGATGATGGATTGATAAGCAAGGAAGAATTTCAATTGGCAATTTTCAATAGTAAGGACAGGGATAATCTCTTTGCAAGCAGGATCTTTGATCTATTTGATGGGAAGAAGAAGGGAGTGATTGACTTTGGTGACTTCGTTAGAGCACTCAATATTTTCCACCCCTACACACCTCAAGAAGTCAAGATTGATTTTTCATTTAGGCTATACGATTTGGATAATACAGGCTTTATAGAGCGAGCTGAGGTCAAGAAAATGGTACTTGCGCTTCTCGGCGAATGTGGTATGAAGATGACAGATGAGATGATAGAACAAATCCTTAACAAGACATTCTTGGATGCTGACCCGAACCAGGATGGGAAAATAGACAAATCCGAGTGGCGGAACTTTGTTTCCAAAAATCCATCACTGCTAAATATCATGACACTTCCCTACCTAAGGGACATAACCACAACTTTCCCAAGCTTCGTATTTAACACCAAGGTTGAAGACTAA 636 0.4009 MGCFYSSPRRRKVAGEEDPISLSSQTVFSISEVEALFELFKGISRSVVDDGLISKEEFQLAIFNSKDRDNLFASRIFDLFDGKKKGVIDFGDFVRALNIFHPYTPQEVKIDFSFRLYDLDNTGFIERAEVKKMVLALLGECGMKMTDEMIEQILNKTFLDADPNQDGKIDKSEWRNFVSKNPSLLNIMTLPYLRDITTTFPSFVFNTKVED* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0826 211 CDD EFh 109 179 IPR002048 GO:0005509
Aev05g0826 211 PRINTS Recoverin family signature 76 97 - -
Aev05g0826 211 PRINTS Recoverin family signature 123 141 - -
Aev05g0826 211 PRINTS Recoverin family signature 169 189 - -
Aev05g0826 211 SUPERFAMILY EF-hand 23 204 IPR011992 -
Aev05g0826 211 PANTHER CALCINEURIN B-LIKE PROTEIN 1 211 - -
Aev05g0826 211 PANTHER CALCINEURIN B 1 211 IPR045198 GO:0005509|GO:0019722|GO:0019900
Aev05g0826 211 ProSiteProfiles EF-hand calcium-binding domain profile. 149 184 IPR002048 GO:0005509
Aev05g0826 211 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Aev05g0826 211 ProSiteProfiles EF-hand calcium-binding domain profile. 105 140 IPR002048 GO:0005509
Aev05g0826 211 SMART efh_1 109 137 IPR002048 GO:0005509
Aev05g0826 211 SMART efh_1 72 100 IPR002048 GO:0005509
Aev05g0826 211 SMART efh_1 153 181 IPR002048 GO:0005509
Aev05g0826 211 ProSitePatterns EF-hand calcium-binding domain. 162 174 IPR018247 -
Aev05g0826 211 Pfam EF-hand domain pair 109 178 IPR002048 GO:0005509
Aev05g0826 211 ProSitePatterns EF-hand calcium-binding domain. 118 130 IPR018247 -
Aev05g0826 211 Gene3D - 18 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0826 Aev-Chr5 5805914 5808788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0826 1 211 EF-hand Containing Proteins AT4G17615 69.668 1.32e-106 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0826 K06268 - osa:4349412 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0826 05 5805914 5808788 Aev05g0826 05 5805914 5808788 ECH
Aev05g0826 05 5805914 5808788 Aev01g0407 01 3430346 3433565 PCT