Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0824 ATGTATAGTAGTAACAGAGAGCGAGTAGGAGGGTCGGAGGGTGTTGTTGTTGATCGCAGGAAGCGAATCAACGATGTGCTCGACAAGCAGTTGCAGCGATCCTCTCCCTCCACTTCCTCTTCCAGGCCCATGAAAGCCCAGGCCCAGGCCCAGGCCCAGGTCCAAGCCCAGGCCCTCTCCCCCTCTAACATCTCTGAGGAATCCGACACTGACACTGGAGGATCAGATGTAAGCGGTTCCGATGATGGCGACGACACCTCTTGGATCTCGTGGTTTTGCAATCTCAGAGGGAACGAGTTCTTCTGCGAGGTCGACGATGATTACATCCAAGACGATTTCAACCTCTGTGGATTGAGCAGCCAAGTGCCTTATTACGATTATGCCCTTGATTTGATCCTCGATGTTGATTCATCCCACGGTGACATGTTTACAGAAGAACAAAATGAGTTGATTGAATCAGCGGCAGAGATGCTTTATGGTTTGATTCACGCTCGATACATTTTGACAAACAAAGGAATGGCTGCCATGCTGGACAAGTACAAGAACTATGACTTTGGTCGATGTCCAAGAGTGTACTGCACCGGACAGCCTTGCCTTCCAGTTGGTCAGTCAGACATCCCTAGGTCGAGTACTGTGAAAATATATTGCCCCAGGTGTGAAGACATTTACTACCCACGATCCAAGTATCAAGATATCGATGGAGCTTATTTTGGAACAACATTCCCTAACCTCTTCCTGATGACTTATGGGCATCTGAAGCCACAAAAGCTGCCACATAGCTACGTTCCACGGGTTTTTGGTTTCAAAATTCACAAGCCATGA 822 0.4842 MYSSNRERVGGSEGVVVDRRKRINDVLDKQLQRSSPSTSSSRPMKAQAQAQAQVQAQALSPSNISEESDTDTGGSDVSGSDDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVDSSHGDMFTEEQNELIESAAEMLYGLIHARYILTNKGMAAMLDKYKNYDFGRCPRVYCTGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQDIDGAYFGTTFPNLFLMTYGHLKPQKLPHSYVPRVFGFKIHKP* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0824 273 Pfam Casein kinase II regulatory subunit 87 269 IPR000704 GO:0005956|GO:0019887
Aev05g0824 273 PRINTS Casein kinase II regulatory subunit family signature 104 118 IPR000704 GO:0005956|GO:0019887
Aev05g0824 273 PRINTS Casein kinase II regulatory subunit family signature 206 227 IPR000704 GO:0005956|GO:0019887
Aev05g0824 273 PRINTS Casein kinase II regulatory subunit family signature 87 103 IPR000704 GO:0005956|GO:0019887
Aev05g0824 273 PRINTS Casein kinase II regulatory subunit family signature 184 205 IPR000704 GO:0005956|GO:0019887
Aev05g0824 273 PRINTS Casein kinase II regulatory subunit family signature 159 180 IPR000704 GO:0005956|GO:0019887
Aev05g0824 273 PRINTS Casein kinase II regulatory subunit family signature 233 250 IPR000704 GO:0005956|GO:0019887
Aev05g0824 273 MobiDBLite consensus disorder prediction 12 28 - -
Aev05g0824 273 SUPERFAMILY Casein kinase II beta subunit 85 272 IPR035991 GO:0005956|GO:0019887
Aev05g0824 273 PANTHER CASEIN KINASE II SUBUNIT BETA-2 6 272 - -
Aev05g0824 273 ProSitePatterns Casein kinase II regulatory subunit signature. 188 219 IPR000704 GO:0005956|GO:0019887
Aev05g0824 273 SMART CK_II_beta_2 87 269 IPR000704 GO:0005956|GO:0019887
Aev05g0824 273 Gene3D - 185 257 - -
Aev05g0824 273 MobiDBLite consensus disorder prediction 29 82 - -
Aev05g0824 273 MobiDBLite consensus disorder prediction 1 82 - -
Aev05g0824 273 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 80 184 IPR016149 GO:0005956|GO:0019887
Aev05g0824 273 PANTHER CASEIN KINASE II SUBUNIT BETA 6 272 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0824 Aev-Chr5 5795044 5796720 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0824 K03115 - fve:101304386 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0824 05 5795044 5796720 Aev05g0824 05 5795044 5796720 ECH
Aev05g0824 05 5795044 5796720 Aev01g0410 01 3454828 3457863 PCT