Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0821 ATGTATAAGATGGATCATTATTCATTATCAAGGATCAGCGAGGACCTAGCGGAGATCGATGGACAAATCGCTGACGTCTTCCGTGCTTTATCAAACGGATTCCAGAAGTTGGAGAAGATTAAGGAGTCTAGTAGGCAGAGCAGGCAATTGGAAGACCTTACAGACAAAATGCGAGACTGTAAGCGGCTTATAAAAGAATTTGACAAAAAAGTAAAGTTTGTGGAGGGTAGAGTTGACAGAGAAACCAACAAAATGCTGAGCGATAAAAAGCAGTCAATGATCAAGGAATTAAATTCATATGTTGCTATGAAAAAGCAATATGCTACAGATATTGAGAATAAACGAGTTGAGCTCTTTGATGGACACAATGATGCTCAGGCAGAAGAGAATGTCTTGCTAGCTTCCTCAATGACGAGTGAACAGCTAATTGATCATGGGCACCATATGATGGATGAAACAGATCAAGCCATTGAGAGGGGAAAGAAAATTGTTTACCAAACAATAGATATTGGAACAGAAACTGCAGCAACTCTCAAGGCTCAGACAGAACAAATGAGCAGAGTGGTCAATGAGCTGGATACTATCAATTTCTCTTTGAAGAGAGCCTCTCATTTGGTCAAGGAAATTGGTAGGCAGGTTGCTACTGACAAGTGTATTCTGACGTTACTTTTCCTTATTATCATGGGAATAGTAGCTATCATGATTATAAAGATTGTGAACCCAGGGATCAAGGAAATTAGTGACATTTCAGGATTAGGTCCTCCAGTTAATAACCGAAGATTGCTTTGGAGTCATACTAGTTGA 804 0.3955 MYKMDHYSLSRISEDLAEIDGQIADVFRALSNGFQKLEKIKESSRQSRQLEDLTDKMRDCKRLIKEFDKKVKFVEGRVDRETNKMLSDKKQSMIKELNSYVAMKKQYATDIENKRVELFDGHNDAQAEENVLLASSMTSEQLIDHGHHMMDETDQAIERGKKIVYQTIDIGTETAATLKAQTEQMSRVVNELDTINFSLKRASHLVKEIGRQVATDKCILTLLFLIIMGIVAIMIIKIVNPGIKEISDISGLGPPVNNRRLLWSHTS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0821 267 SMART tSNARE_6 142 209 IPR000727 -
Aev05g0821 267 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 147 209 IPR000727 -
Aev05g0821 267 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 9 255 - -
Aev05g0821 267 Gene3D - 139 217 - -
Aev05g0821 267 SUPERFAMILY SNARE fusion complex 137 210 - -
Aev05g0821 267 Pfam Sec20 156 231 IPR005606 GO:0005484|GO:0006890
Aev05g0821 267 Coils Coil 50 70 - -
Aev05g0821 267 CDD SNARE_SNAP25N_23N_29N_SEC9N 144 208 IPR044766 GO:0005484|GO:0031201
Aev05g0821 267 PANTHER NOVEL PLANT SNARE 11 9 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0821 Aev-Chr5 5776692 5778914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0821 K08494 - gmx:100786429 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0821 05 5776692 5778914 Aev05g0821 05 5776692 5778914 ECH