Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0810 ATGGACGCGCAACAGAGCAATCTATTCGAGACAGCTTCGCAACCTGACACCGGTAACGACGCATACACCTTCCTCGAATTCAATACTCAGGGCGAGGATTTCGATTACCCTGAGTTTCGCGACCCGATTAGGTCCTCGGTGGCCTGGCCCACGCCATCTGATTCGCTCGCGGACACCTCGGAGCGCGGCGGTGGTAGCGGAGGAGCTGGGTCCGATCACCAGTCAGATGCTTCTCCGGTTTCGGCAGCTGCTGGGGGCGCTGCCGCGAAAGGGGGGCGTTCAGGGAGCAGCAGCGGCGGAAATAGCAGCAGCCAGATGGTGGATGCGTTGGCGGCCGGGATGAGCGGGTTGAACTTCGAAGACACTGGGGATGATGATAGTTTCGAGTATGGTAAAGGAGATTTCACCGAACACGCTTGTAGGTATTGTGGGGTGTCTAATCCAGCTTGTGTTGTGAGGTGCAATGTGCCTTCGTGTCGGAAATGGTTCTGCAATTCGCGGGGGAACACCTCGGGGTCTCATATTGTGAATCATCTGGTTCGGGCAAAACACAAGGAGGTCTGTCTACATAAAGATAGTCCATTGGGGGAAACAATTCTTGAATGCTACAACTGTGGGTGTCGCAATGTGTTTCTCCTGGGATTTATTTCTGCTAAGACTGAAAGTGTAGTTGTTCTTCTTTGTCGTGAGCCTTGCTTGAGTGTCAATGCCTTGAAGGACATGAATTGGGACCTTAGTCAATGGTGCCCCTTGATTGATGATAGGTGCTTCTTGCAGTGGCTTGTCAAGGTCCCATCTGAACAGGAGCAATTAAGAGCACGCCAAATAAGTGCACAGCAGATAAATAAGGTGGAAGAGTTGTGGAAGACAAATCCAGATGCTTCTTTTGAGGACCTTGAGAAGCCTGGTGTAGATGATGAACCTCAGCCAGTGGCTTTGAAATACGAAGATGCATATCAGTATCAAAATGTATTTGCACCGCTTATTAAGCTTGAAGCTGATTATGATAAGATGATGAAAGAATCACAAAGCAAGGACAATGTGACAATTCGCTGGGATGTTGGTCTTAACAAGAAGCGTGTTGCATACTTTGTGTTTCCAAAGGAAGACAATGAACTACGGCTTGTACCCGGTGATGAGTTACGATTGCGTTATTCTGGTGATGCTGCACATCCTGCCTGGCAGTCAGTGGGTCATGTGATTAAGCTAACTGCACAAGAAGAGGTTGCACTAGAGCTTCGTGCTAGTCAGGGGGTTCCAATTGATGTAAACCATGGCTTTAGTGTTGATTTTGTCTGGAAGAGTACAAGCTTTGACAGGATGCAGGGAGCTATGAAAACGTTTGCTGTGGATGAGACAAGTGTGAGTGGGTATATCTATCATCACTTATTGGGTCACGAAGTTGAGGTTCAGATGGTGCGTAATGCATTGCCTCGTCGCTTTGGTGCACCTGGGCTACCAGAGCTTAATGCATCTCAAGTTTTTGCAGTTAAAAGTGTTCTTCAGAGGCCTATAAGTTTGATTCAAGGTCCACCTGGGACTGGTAAGACTGTAACTTCTGCAGCACTTGTATATCACATGGCCAAACAAGGGCAGGGGCAGGTTTTGGTTTGTGCACCTAGTAATGTTGCTGTGGATCAGCTGGCAGAAAAAATAAGTGCTACTGGATTAAAGGTTGTGCGGCTCTGTGCAAAGTCAAGGGAAGCTGTAAGTTCTCCTGTTGAGCATTTAACGCTTCACTATCAGGTTCGACATCTTGACACATCTGATAAGAGTGAACTTCATAAGTTACAACAGCTGAAGGATGAACAAGGAGAACTTTCCAGCAGTGATGAGAAAAAGTACAAAGCGCTGAAGCGAGCAACAGAGAGGGAGATTTCTCAGAGTGCTGATGTGATCTGCTGTACTTGTGTTGGTGCTGGGGATCCTCGGCTTGCAAATTTTAGGTTCCGTCAGGTACTTATTGACGAGTCCACTCAAGCAACAGAACCTGAGTGTCTCATTCCTTTGGTTATGGGTGCGAAGCAGGTTGTTCTTGTTGGTGATCACTGTCAGCTTGGACCAGTGATTATGTGCAAGAAAGCAGCTCGTGCTGGGTTAGCACAGTCACTTTTTGAACGCCTTGTTTTACTCGGTGTCAAACCGATTCGGTTACAGGTTCAGTACCGTATGCATCCATGCCTCTCAGAATTTCCCTCAAACAGTTTTTATGAAGGTACCCTGCAAAATGGAGTCACTGTTAATGAAAGGCAATCACCAGGAATTGATTTTCCATGGCCTGTGCCAAACCGTCCAATGTTTTTTTATGTTCAGATGGGACAAGAAGAGATAAGTGCAAGTGGAACATCTTATTTAAATAGGACTGAAGCTGCAAACGTGGAGAAGATTGTCACCACTTTCTTAAAAAGTGGTGTGGTCCCAAGTCAGATTGGTGTGATAACACCTTATGAGGGGCAACGAGCTTATATTGTAAACTATATGTCAAGAAATGGTGCTCTCAGACAGCAACTTTACAAGGAAATTGAGGTTGCTAGTGTTGATTCCTTTCAAGGAAGGGAGAAAGACTTCATTATTCTATCATGTGTTAGAAGTAATGAACATCAGGGCATTGGATTCTTGAATGATCCAAGGAGGCTCAATGTTGCTTTGACTCGAGCAAGATATGGTATTGTTATTCTGGGAAACCCTAAAGTTCTGAGCAAGCAACCTCTATGGAATGGTTTATTGACACACTACAAGGAAAATGAATGTTTAGTTGAAGGACCTTTGAATAACTTGAAGCAGAGCATGGTTCAGTTCCAGAAACCCAAGAAGATTTACAACGAAAGAAGGCTGTTTTACGGGGGTGGACCTGGAATTGCAGCTAATGATACTTTTGGTTCTGTTGGTGGTGGCGCTACCTCGGACCGAAGGAGCAGTCGTGGAAGGGGATCATATTTGCCTCCTGGCCCACCAAATGGAACCCAGAAGCCTGGAGTGCATCCTGCTGGGTATCCTATTCCAAGGGTTCCCATGCCTCCTTTTCATGGTGGACCCCAGTCTCAACCATATGCTATACCATCTCGTGGAGCTGTACATGGGCCTGTTGGGGCTGTCCCTCATGTACCATCTCCAGGGAGTCGGGGTTTTGGGGCTGGGAGAGGTAATTCTGCTGCTCCAGTTGGCAATGTTCCCCACCAACAAGGCTCGCAACAATCTATTGGGAATCTTGGATCTACATATAACTTCCCTGCTCTGGAGAATCCCAACAGCCAGCCATCTGTTGGTGGTCCATTATCTCAACCTGGCTTTGCCAATAATATGCCAGTCCAAGGGGCAGGCCAATCATTTCGAGATCAGTTTTCTGTGCCGGGAATGTCGCAGGACTTCTTGGGTGATGACTTCAAAAGCCAAGGGTCACATGTTCCATATAATGTTACCGACTTTGCTACACAGGCCTCGCAAAGTGGATATGCTGTTGATTATGCCACACAAGGTGCACAAGGTGGATTCCCAGGGAACTTTATGAACCAGAATTCTCAAGCTGGATATTCACGTTTTGGTTCTGGAAATGAATTTATGTCTCAGGACTACATGGCCCATGGATCGCAAGGTCTTTTCACTCAGGCTGGATTCGGCGATCCCTTGCAAGATGACGCAACACAGAGTCATTTTGGTGTGGCCAATGCCAATCCTCTCCAATCCCAGATGAATTCTCTCTACTCCCAGCCATTCGCTCATTACAACTCGCAGCCGCTGAACTTGCAGGCTTCCCAACAGCAGCCTCAGGCAACTGGGTTTTGTGCTGAAAATATGTTTGCAGAGGAGACATCCGAAGGATTGCCTCCCTGGGATCTCTGTCTGCAATGCATAACCCATTCTGAAGAATTGGTGCAGCAATTGTTCGAGAAAAGCATTACATGGAATGGTTTTGTGGAAAAGGGTTTCCTTTCAATCTTGAAGCACAAGGGGACGGTATAA 3960 0.4689 MDAQQSNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSSVAWPTPSDSLADTSERGGGSGGAGSDHQSDASPVSAAAGGAAAKGGRSGSSSGGNSSSQMVDALAAGMSGLNFEDTGDDDSFEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEKPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPIDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVMGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSPGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDFIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKENECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGIAANDTFGSVGGGATSDRRSSRGRGSYLPPGPPNGTQKPGVHPAGYPIPRVPMPPFHGGPQSQPYAIPSRGAVHGPVGAVPHVPSPGSRGFGAGRGNSAAPVGNVPHQQGSQQSIGNLGSTYNFPALENPNSQPSVGGPLSQPGFANNMPVQGAGQSFRDQFSVPGMSQDFLGDDFKSQGSHVPYNVTDFATQASQSGYAVDYATQGAQGGFPGNFMNQNSQAGYSRFGSGNEFMSQDYMAHGSQGLFTQAGFGDPLQDDATQSHFGVANANPLQSQMNSLYSQPFAHYNSQPLNLQASQQQPQATGFCAENMFAEETSEGLPPWDLCLQCITHSEELVQQLFEKSITWNGFVEKGFLSILKHKGTV* 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0810 1319 MobiDBLite consensus disorder prediction 997 1013 - -
Aev05g0810 1319 CDD SF1_C_Upf1 724 913 IPR041679 -
Aev05g0810 1319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 947 IPR027417 -
Aev05g0810 1319 Pfam AAA domain 701 896 IPR041679 -
Aev05g0810 1319 Gene3D - 344 432 - -
Aev05g0810 1319 Gene3D - 723 934 IPR027417 -
Aev05g0810 1319 Gene3D - 452 722 IPR027417 -
Aev05g0810 1319 PANTHER DNA2/NAM7 HELICASE FAMILY 114 1038 IPR045055 -
Aev05g0810 1319 MobiDBLite consensus disorder prediction 1 105 - -
Aev05g0810 1319 CDD ZBD_UPF1-like 139 261 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Aev05g0810 1319 MobiDBLite consensus disorder prediction 1054 1099 - -
Aev05g0810 1319 CDD 1B_UPF1-like 344 431 IPR040812 -
Aev05g0810 1319 Gene3D - 574 626 - -
Aev05g0810 1319 MobiDBLite consensus disorder prediction 1 26 - -
Aev05g0810 1319 Pfam Type III restriction enzyme, res subunit 494 556 IPR006935 GO:0003677|GO:0005524|GO:0016787
Aev05g0810 1319 PANTHER REGULATOR OF NONSENSE TRANSCRIPTS 1-LIKE PROTEIN 114 1038 - -
Aev05g0810 1319 CDD DEXXQc_UPF1 488 723 - -
Aev05g0810 1319 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 497 629 IPR014001 -
Aev05g0810 1319 MobiDBLite consensus disorder prediction 957 1099 - -
Aev05g0810 1319 Pfam AAA domain 588 691 IPR041677 GO:0004386
Aev05g0810 1319 Pfam RNA helicase UPF1, 1B domain 343 432 IPR040812 -
Aev05g0810 1319 Pfam RNA helicase (UPF2 interacting domain) 138 291 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0810 Aev-Chr5 5638011 5648913 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0810 K14326 - gmx:100795594 2382.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0810 05 5638011 5648913 Aev05g0810 05 5638011 5648913 ECH